Information for CAZyme ID: QHV99976.1
Basic Information
| GenBank ID | QHV99976.1 |
| Family | GH2 |
| Sequence Length | 1115 |
| UniProt ID | A0A6P1W8G1(100,100) |
| Average pLDDT? | 92.84 |
| CAZy50 ID | 9231 |
| CAZy50 Rep | No, QPH41758.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2666025 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma endbachense |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MLYKVIAFCL LIPVIGNAQL VDKTPAAIPN QPRIYQTEPY EDPLVSGINR DASRATAYSF | 60 |
| ATVNDALSVN RDKTSRYLSL NGEWDFAFSL KPADAPSDFY TKRVSGWKKI PVPSSWEMQG | 120 |
| YDKPIYKSAV YPFRPVNPPH VPQDYNGVGC YQRTFTVPAD WSNMNVTLHF GGVSSAYKVW | 180 |
| LNGKFVGYAE DSFLSSEFNI TPYLQKGENV LSVWVIRWSD GSFLEDQDQW RMSGIHREVM | 240 |
| LMAEPKLRIA DFFYQTKLDG DYKDALLSIR PRIENLTGNE VPGYQLKAQL YTKQNEPVFE | 300 |
| KPLQTSVESI INEIYPRLDN AKFGILEAKL KNPAKWSDEE PNLYTLVLSL EDSTGKLLEA | 360 |
| KSCKLGFRSI EFSKADSKLL INGKKTYLYG VNRPDHHPTK GKALTREDLL QDVLTIKRFN | 420 |
| FNCIRTSHYP SDPYLYDLCD EFGILVIDEA NLETHGLGSK LSNDALWTGA YLERSSRMAL | 480 |
| RDKNHPSIIF WSLGNEAGRG PNHAAMAAWI HDFDITRPVH YEPAMGSPAM AGYMDNKDPR | 540 |
| YLKPNDHSHR IQNPQDQYYV DMVSRMYPAM YTPELLANQA NGDTRPIFFC EYAHAMGNSV | 600 |
| GNIREFWDLF RQTKRIIGGC IWEFKDQGLL KKDEQGMPFF AYGGDFGEKY FDNFTIKGVV | 660 |
| AADGRPKAAM YECKRVFQGI ESEWQDAQKG LMHITNRHAV KNASAYSGQI SIREDGRVIV | 720 |
| TQPLPILNLA AGHDTVINIS AFLPKQKNGS EYLADIQFSL AADESWAVKG FDVASNQLPI | 780 |
| PQTSTEPTRK PSGAVVSLSE DGKIYTVKGD GFAVEINKIN GALTSYKVAG KEQIFSPLLP | 840 |
| HFSRPLTDND KRGWKPQRKL KPWYDPQLTL KTLTAQTIDK GSIKLTSTYS LMNDSAQVEV | 900 |
| NYLVRGNGVV GVDFAIKPAF PLPNMPKVGM QGGIERSYES ITWYGRGPLE NYVDRRYGFD | 960 |
| AGVYSKTLTD FMEPYVVPQE NGNRTDVRWM YLSNSGTKNG LLVVADSLLS MSAWPYTEAN | 1020 |
| IQSAKHTNKL QDAGYITLNI DLVQMGVGGN DSWSDVAAPL DQYQIKAKPY QYRFYLLPLT | 1080 |
| KPKEEPGAIA RKIKDVHRTS RTQLPDRSTL TGSLK | 1115 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(62-956)
| MLYKVIAFCL LIPVIGNAQL VDKTPAAIPN QPRIYQTEPY EDPLVSGINR DASRATAYSF | 60 |
| ATVNDALSVN RDKTSRYLSL NGEWDFAFSL KPADAPSDFY TKRVSGWKKI PVPSSWEMQG | 120 |
| YDKPIYKSAV YPFRPVNPPH VPQDYNGVGC YQRTFTVPAD WSNMNVTLHF GGVSSAYKVW | 180 |
| LNGKFVGYAE DSFLSSEFNI TPYLQKGENV LSVWVIRWSD GSFLEDQDQW RMSGIHREVM | 240 |
| LMAEPKLRIA DFFYQTKLDG DYKDALLSIR PRIENLTGNE VPGYQLKAQL YTKQNEPVFE | 300 |
| KPLQTSVESI INEIYPRLDN AKFGILEAKL KNPAKWSDEE PNLYTLVLSL EDSTGKLLEA | 360 |
| KSCKLGFRSI EFSKADSKLL INGKKTYLYG VNRPDHHPTK GKALTREDLL QDVLTIKRFN | 420 |
| FNCIRTSHYP SDPYLYDLCD EFGILVIDEA NLETHGLGSK LSNDALWTGA YLERSSRMAL | 480 |
| RDKNHPSIIF WSLGNEAGRG PNHAAMAAWI HDFDITRPVH YEPAMGSPAM AGYMDNKDPR | 540 |
| YLKPNDHSHR IQNPQDQYYV DMVSRMYPAM YTPELLANQA NGDTRPIFFC EYAHAMGNSV | 600 |
| GNIREFWDLF RQTKRIIGGC IWEFKDQGLL KKDEQGMPFF AYGGDFGEKY FDNFTIKGVV | 660 |
| AADGRPKAAM YECKRVFQGI ESEWQDAQKG LMHITNRHAV KNASAYSGQI SIREDGRVIV | 720 |
| TQPLPILNLA AGHDTVINIS AFLPKQKNGS EYLADIQFSL AADESWAVKG FDVASNQLPI | 780 |
| PQTSTEPTRK PSGAVVSLSE DGKIYTVKGD GFAVEINKIN GALTSYKVAG KEQIFSPLLP | 840 |
| HFSRPLTDND KRGWKPQRKL KPWYDPQLTL KTLTAQTIDK GSIKLTSTYS LMNDSAQVEV | 900 |
| NYLVRGNGVV GVDFAIKPAF PLPNMPKVGM QGGIERSYES ITWYGRGPLE NYVDRRYGFD | 960 |
| AGVYSKTLTD FMEPYVVPQE NGNRTDVRWM YLSNSGTKNG LLVVADSLLS MSAWPYTEAN | 1020 |
| IQSAKHTNKL QDAGYITLNI DLVQMGVGGN DSWSDVAAPL DQYQIKAKPY QYRFYLLPLT | 1080 |
| KPKEEPGAIA RKIKDVHRTS RTQLPDRSTL TGSLK | 1115 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.