Information for CAZyme ID: QHU98701.1
Basic Information
| GenBank ID | QHU98701.1 |
| Family | GT5 |
| Sequence Length | 491 |
| UniProt ID | A0A6P1VBG6(100,100) |
| Average pLDDT? | 96.43 |
| CAZy50 ID | 23437 |
| CAZy50 Rep | No, CCE25163.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1933929 |
| Kingdom | Bacteria |
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Synechococcales |
| Family | Merismopediaceae |
| Genus | Synechocystis |
| Species | Synechocystis sp. CACIAM 05 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MYIVQIASEC APVIKAGGLG DVIYGLSREL ELRGHCVELI LPMYDCMRYD HIWGLHDAYR | 60 |
| NLEVPWYGSS IFCDVFCGWV HGRLCFFIQP KSSDNFFNRG HYYGALDDHM RFAFFSKAAM | 120 |
| EFLLRSNKRP DIIHCHDWQT GLVPVLLYEI YRFHGMDHQR VCYTIHNFKH QGIAGANILH | 180 |
| ATGLNNDSYY FSYDRLQDNF NPNAINFMKG GIVYSNYVNT VSPHHAWEAR FSDISCGLGH | 240 |
| TLEIHQQKFG GILNGLDYEV WNPEIDPLLA SNFSVKTFGD KAKNKQALRE RLLLETDDKK | 300 |
| PMLCFIGRLD GQKGVHLVHH SIYYALSQGA QFVLLGSATE PNLSKWFWHE KQHLNDNPNV | 360 |
| HLELGFDEEL AHLIYGAADI IVVPSNYEPC GLTQMIGLRY GAVPVVRGVG GLVNTVFDRD | 420 |
| YDQNHPPEKR NGFVFYQPDE YALETALSRA IALYKDDPVA FKTLALQGMA YDYSWNKPGL | 480 |
| QYVEAYEYIR A | 491 |
Predicted 3D structure by AlphaFold2 with pLDDT = 96.43 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT5(3-487)
| MYIVQIASEC APVIKAGGLG DVIYGLSREL ELRGHCVELI LPMYDCMRYD HIWGLHDAYR | 60 |
| NLEVPWYGSS IFCDVFCGWV HGRLCFFIQP KSSDNFFNRG HYYGALDDHM RFAFFSKAAM | 120 |
| EFLLRSNKRP DIIHCHDWQT GLVPVLLYEI YRFHGMDHQR VCYTIHNFKH QGIAGANILH | 180 |
| ATGLNNDSYY FSYDRLQDNF NPNAINFMKG GIVYSNYVNT VSPHHAWEAR FSDISCGLGH | 240 |
| TLEIHQQKFG GILNGLDYEV WNPEIDPLLA SNFSVKTFGD KAKNKQALRE RLLLETDDKK | 300 |
| PMLCFIGRLD GQKGVHLVHH SIYYALSQGA QFVLLGSATE PNLSKWFWHE KQHLNDNPNV | 360 |
| HLELGFDEEL AHLIYGAADI IVVPSNYEPC GLTQMIGLRY GAVPVVRGVG GLVNTVFDRD | 420 |
| YDQNHPPEKR NGFVFYQPDE YALETALSRA IALYKDDPVA FKTLALQGMA YDYSWNKPGL | 480 |
| QYVEAYEYIR A | 491 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.