Information for CAZyme ID: QHS59558.1
Basic Information
GenBank ID | QHS59558.1 |
Family | CE12, GH28 |
Sequence Length | 731 |
UniProt ID | A0A6B9ZB88(100,100)![]() |
Average pLDDT? | 94.90 |
CAZy50 ID | 27687 |
CAZy50 Rep | No, UEG49495.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2703787 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Chitinophagia |
Order | Chitinophagales |
Family | Chitinophagaceae |
Genus | Chitinophaga |
Species | Chitinophaga agri |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKLYLLALLF PLISWIPTDD PPRIFMIGDS TMADKPLADN PERGWGQLFP LFLQKGVTVK | 60 |
NYAVNGRSTK SFINEHRWDS VLVQLKAGDW VIIQFGHNDS KKDDSTRFAA PKGAYKDNLI | 120 |
RFVKEVRAKG ANPVLVTPVQ RRKFDEKGTF VDQHGEYPGV VREIAASYKV PLIDLHKSSE | 180 |
ALLVQHGVAG SEKLFKTTPA GHYTALPNGV TDNTHFNTYG ATLVAGLVAR EIREKHIGLE | 240 |
RYLAQTEFEG KYRFDLPEIY EPHFKRDTLM ITAFGAKPDG VTLNSKSIND AITKASANGG | 300 |
GVVMIPPGLW LTGPIVLKSN VNLYLAPNAL LQFTTDFDQY PLVETTYEGL RAMRCQAPVS | 360 |
AVNAENIAIT GKGIIDGGGD AWRIVKKDKL TESQWKKLLA SGGIEGEDKK TWYPSAKSQK | 420 |
GSHTKLAGVI APGKTLADYD DIKDFLRPNL LSITSCKYVL LEGVTFQNSP AWCLHPLLTE | 480 |
HITLRDIYAK NPWYAQNGDG VDLESCRYAR IEGCTFDVGD DGICIKSGRD EQGRKRGVAT | 540 |
EDVIVNNCTV YHAHGGFVVG SEMSGGARNL YVSNCSFLGT DIGLRFKTTR GRGGIVEKIY | 600 |
VNNINMKDIP AEAILFDMYY MAKDPVPLSG EKRDAPKVEL FPVTEATPQF KDFHITNVVC | 660 |
HGAEKAIFIR GLPEMPISDI YLKDITIKAK KAGDCIVGSN INMTNVTLIT TDNGKINVQD | 720 |
SKQVKLDISK R | 731 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.90 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CE12(23-232)+GH28(295-699)
MKLYLLALLF PLISWIPTDD PPRIFMIGDS TMADKPLADN PERGWGQLFP LFLQKGVTVK | 60 |
NYAVNGRSTK SFINEHRWDS VLVQLKAGDW VIIQFGHNDS KKDDSTRFAA PKGAYKDNLI | 120 |
RFVKEVRAKG ANPVLVTPVQ RRKFDEKGTF VDQHGEYPGV VREIAASYKV PLIDLHKSSE | 180 |
ALLVQHGVAG SEKLFKTTPA GHYTALPNGV TDNTHFNTYG ATLVAGLVAR EIREKHIGLE | 240 |
RYLAQTEFEG KYRFDLPEIY EPHFKRDTLM ITAFGAKPDG VTLNSKSIND AITKASANGG | 300 |
GVVMIPPGLW LTGPIVLKSN VNLYLAPNAL LQFTTDFDQY PLVETTYEGL RAMRCQAPVS | 360 |
AVNAENIAIT GKGIIDGGGD AWRIVKKDKL TESQWKKLLA SGGIEGEDKK TWYPSAKSQK | 420 |
GSHTKLAGVI APGKTLADYD DIKDFLRPNL LSITSCKYVL LEGVTFQNSP AWCLHPLLTE | 480 |
HITLRDIYAK NPWYAQNGDG VDLESCRYAR IEGCTFDVGD DGICIKSGRD EQGRKRGVAT | 540 |
EDVIVNNCTV YHAHGGFVVG SEMSGGARNL YVSNCSFLGT DIGLRFKTTR GRGGIVEKIY | 600 |
VNNINMKDIP AEAILFDMYY MAKDPVPLSG EKRDAPKVEL FPVTEATPQF KDFHITNVVC | 660 |
HGAEKAIFIR GLPEMPISDI YLKDITIKAK KAGDCIVGSN INMTNVTLIT TDNGKINVQD | 720 |
SKQVKLDISK R | 731 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.