CAZyme3D

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Entry ID

Information for CAZyme ID: QHN50238.1

Basic Information

GenBank IDQHN50238.1
FamilyCBM48, GH13_9
Sequence Length680
UniProt IDA0A857MSZ4(100,100)Download
Average pLDDT?91.09
CAZy50 ID13857
CAZy50 RepNo, QAV27616.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1422
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusGeobacillus
SpeciesGeobacillus stearothermophilus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MYGHHLASER  MRSSLIAANP  TDLEVYLFHE  GSLHKSYELF  GAHVIDEGGR  AATRFCVWAP60
HARDVRLVGS  FNGWDGAKFR  LTKVNDEGVW  TIVVPENLEG  HLYKYEIITP  DGRVLLKADP120
YAFYSELRPH  TASIVYDLKG  YQWNDSSWQR  KKRRKRIYDQ  PMVIYELHFG  SWKKKPDGRF180
YTYREMADEL  IPYVLERGFT  HIELLPLVEH  PLDRSWGYQG  TGYYAVTSRY  GAPHDFMYFV240
DRCHQAGIGV  ILDWVPGHFC  KDAHGLYMFD  GAPTYEYANE  KDRENYVWGT  ANFDLGKPEV300
RSFLISNALF  WLEYYHVDGF  RVDAVANMLY  WPNNDQLYEN  PYAVEFLRKL  NEAVFAYDPN360
VLMIAEDSTD  WPRVTAPTYD  GGLGFNYKWN  MGWMNDMLKY  METPPHERKH  AHNQVTFSLL420
YAYSENFILP  FSHDEVVHGK  KSLLNKMPGS  YEEKFAQLRL  LYGYMMAHPG  KKLLFMGNEF480
AQFDEWKFEG  ELDWVLFDFD  LHRKMDEYVK  QLIACYKRYK  PFYELDHDPQ  GFEWIDVHNA540
EQSIFSFVRR  GKKDGDLLVI  VCNFTNQAYD  DYKVGVPLLA  PYREVLNSDA  VDFGGSGHVN600
SKRLPAFNEP  FHGKPYHVRM  TIPPFGISIL  RPVQKRGERK  QNEEDVHRHV  IGRRARKPAS660
LADEKHRETS  RAVWGEVPDH  680

Predicted 3D structure by AlphaFold2 with pLDDT = 91.09 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(40-123)+GH13_9(192-482)

MYGHHLASER  MRSSLIAANP  TDLEVYLFHE  GSLHKSYELF  GAHVIDEGGR  AATRFCVWAP60
HARDVRLVGS  FNGWDGAKFR  LTKVNDEGVW  TIVVPENLEG  HLYKYEIITP  DGRVLLKADP120
YAFYSELRPH  TASIVYDLKG  YQWNDSSWQR  KKRRKRIYDQ  PMVIYELHFG  SWKKKPDGRF180
YTYREMADEL  IPYVLERGFT  HIELLPLVEH  PLDRSWGYQG  TGYYAVTSRY  GAPHDFMYFV240
DRCHQAGIGV  ILDWVPGHFC  KDAHGLYMFD  GAPTYEYANE  KDRENYVWGT  ANFDLGKPEV300
RSFLISNALF  WLEYYHVDGF  RVDAVANMLY  WPNNDQLYEN  PYAVEFLRKL  NEAVFAYDPN360
VLMIAEDSTD  WPRVTAPTYD  GGLGFNYKWN  MGWMNDMLKY  METPPHERKH  AHNQVTFSLL420
YAYSENFILP  FSHDEVVHGK  KSLLNKMPGS  YEEKFAQLRL  LYGYMMAHPG  KKLLFMGNEF480
AQFDEWKFEG  ELDWVLFDFD  LHRKMDEYVK  QLIACYKRYK  PFYELDHDPQ  GFEWIDVHNA540
EQSIFSFVRR  GKKDGDLLVI  VCNFTNQAYD  DYKVGVPLLA  PYREVLNSDA  VDFGGSGHVN600
SKRLPAFNEP  FHGKPYHVRM  TIPPFGISIL  RPVQKRGERK  QNEEDVHRHV  IGRRARKPAS660
LADEKHRETS  RAVWGEVPDH  680

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help