CAZyme3D

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Entry ID

Information for CAZyme ID: QHM91347.1

Basic Information

GenBank IDQHM91347.1
FamilyGT112
Sequence Length423
UniProt IDA0A6P1QC58(100,100)Download
Average pLDDT?93.37
CAZy50 ID36924
CAZy50 RepNo, BAM89986.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID438
KingdomBacteria
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAcetobacteraceae
GenusAcetobacter
SpeciesAcetobacter pasteurianus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTEQTTVTNT  QANQSKPAQT  PPYPTAAALP  TQQAPKNIRF  DFNEGCRVHL  PLLEETEGTW60
RIELTDLDTG  NILFAQAGLS  QALVRSSKRW  YVRFGITVWQ  DHTAEDGKVT  STQVFSHAYD120
SKDKQILIIF  PVGTLGDTLA  WVPYAARFAE  VRQAQVTCAM  SELLIPLFQN  AYPHINFVTH180
DDVRTNKLTE  QAYATYYLGL  FFDDAACDWQ  PSDFRLVGLH  KTAAYILGVS  TKEEPAKISF240
PDEGRPIEEP  YVCIAAQASS  QCKYWNNPTG  WDEVIKWLKA  QGYRVICIDQ  KTVHGTGIVW300
NHIPYGAEDQ  TGSRPLTERA  RWLKHAAFFI  GLGSGLSWLA  WSTGTPVVMI  AGFSHPTTEF360
ETPFRIINWH  TCNSCWNDPK  ERFDHHDFLW  CPRHANTPRQ  FECTRLITAQ  QVIATIKPLV420
HKR423

Predicted 3D structure by AlphaFold2 with pLDDT = 93.37 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT112(30-417)

MTEQTTVTNT  QANQSKPAQT  PPYPTAAALP  TQQAPKNIRF  DFNEGCRVHL  PLLEETEGTW60
RIELTDLDTG  NILFAQAGLS  QALVRSSKRW  YVRFGITVWQ  DHTAEDGKVT  STQVFSHAYD120
SKDKQILIIF  PVGTLGDTLA  WVPYAARFAE  VRQAQVTCAM  SELLIPLFQN  AYPHINFVTH180
DDVRTNKLTE  QAYATYYLGL  FFDDAACDWQ  PSDFRLVGLH  KTAAYILGVS  TKEEPAKISF240
PDEGRPIEEP  YVCIAAQASS  QCKYWNNPTG  WDEVIKWLKA  QGYRVICIDQ  KTVHGTGIVW300
NHIPYGAEDQ  TGSRPLTERA  RWLKHAAFFI  GLGSGLSWLA  WSTGTPVVMI  AGFSHPTTEF360
ETPFRIINWH  TCNSCWNDPK  ERFDHHDFLW  CPRHANTPRQ  FECTRLITAQ  QVIATIKPLV420
HKR423

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help