CAZyme3D

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Entry ID

Information for CAZyme ID: QHJ71814.1

Basic Information

GenBank IDQHJ71814.1
FamilyGH126
Sequence Length327
UniProt IDA0A7Z2NM63(100,100)Download
Average pLDDT?88.08
CAZy50 ID136327
CAZy50 RepNo, ANU17778.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2233542
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPlanococcaceae
GenusPlanococcus
SpeciesPlanococcus halotolerans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRRLFLPFTL  LILALSACDN  SGSVSAPEKK  VVPQDFAESY  FNEEKYIHAY  PNAKDSQYLS60
ESIGLYMEYL  VLMEDEEKFA  EQYDNLLNEF  ITEEGEENLF  VNWLIFEDAT  VNALIDDIRI120
AAALREADKL  FDQPEYSKTA  DKIIGTISRI  QTNNNYTVDY  YDWEIESPAQ  RVTLSYLISD180
VPENLNADRL  LENVDADAVF  FPEYFDVLEE  VYVKNEVVHM  IDQLLIAINK  ERIGLSSGLF240
EEWLITEWEE  EGRLFGRYDR  ETHEPRVMYE  SLAMYFYMNE  YFLVIGEDEK  AEEVKERATA300
IIETNGTAET  HFFDFIHYHL  MMEDDTK327

Predicted 3D structure by AlphaFold2 with pLDDT = 88.08 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH126(51-299)

MRRLFLPFTL  LILALSACDN  SGSVSAPEKK  VVPQDFAESY  FNEEKYIHAY  PNAKDSQYLS60
ESIGLYMEYL  VLMEDEEKFA  EQYDNLLNEF  ITEEGEENLF  VNWLIFEDAT  VNALIDDIRI120
AAALREADKL  FDQPEYSKTA  DKIIGTISRI  QTNNNYTVDY  YDWEIESPAQ  RVTLSYLISD180
VPENLNADRL  LENVDADAVF  FPEYFDVLEE  VYVKNEVVHM  IDQLLIAINK  ERIGLSSGLF240
EEWLITEWEE  EGRLFGRYDR  ETHEPRVMYE  SLAMYFYMNE  YFLVIGEDEK  AEEVKERATA300
IIETNGTAET  HFFDFIHYHL  MMEDDTK327

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help