CAZyme3D

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Entry ID

Information for CAZyme ID: QHI70352.1

Basic Information

GenBank IDQHI70352.1
FamilyGH165
Sequence Length860
UniProt IDA0A6P1M8I8(100,100)Download
Average pLDDT?89.76
CAZy50 ID15288
CAZy50 RepNo, QHI70353.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2697043
KingdomBacteria
PhylumKiritimatiellota
ClassTichowtungiia
OrderTichowtungiales
FamilyTichowtungiaceae
GenusTichowtungia
SpeciesTichowtungia aerotolerans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVKKAVLFRG  ASLLCLTLAG  WICSAPISGP  GAKVESLSGA  TVEMFVPGVE  IFSNRRFTLA60
ECPDFLNGIP  FFQEDINTSS  FRVLKDGVIT  VLTPESDHFK  SAQFQALETS  GFTRVEEPPL120
FQLFGDSPAN  KVRIYQKSVK  AGADYTFGKW  VVVLGFEDEQ  IAQINAKKTA  LADALKSAAS180
GPGAGLELTG  GYEADCVDVF  TPGVKLFSNR  DFVLNECPES  LAGQLFLRGN  INGDKFNVVR240
DGTLTVLTPE  SDQFSSAQGG  ALMQEGFQRV  AEPQLFQLFG  DLSANKVGIY  SKKVTAGEQY300
AFGKWTIVLG  FAVAEPWKPK  PWNENEGEVL  YNGIQLPEVW  PPEHIDPRSK  KPMPVPYLDY360
PPEVIPIDVG  RQLLVDDFLI  EKTDLQRTFH  YPEKYEGNPV  LKPENDLEDG  AGSGWAGATP420
KSGGLWWDPD  AQLFKLWYEA  GWLGTICYAT  SKDGIHWDRP  ETDVLSGYNQ  VLPFGLKPDS480
WTVVRDWWTK  DPDAKYKIFV  RGPGGKPEGA  MCFESPDGIH  FGDYTMSGVM  GDRSTMFYNP540
FRKKWVYSLR  SSFRGRSRHY  WEADDFIDGC  KWPDFDLKGA  SWEKGQPVIW  AASDELDPED600
VEVKQGTQLY  NLDAVAYESI  MLGFYQIWRG  PHNHQCFGVP  KITELNFAYS  RDGFHWARPD660
RNTAIESSRE  AGTWDRGYVQ  SLGNICVLRG  DKIWFYYSGF  AGDESRPKGG  MYANSAMGLA720
TLRRDGFASM  DTRLSGELLT  RPVTFSGKYL  FVNADVPDGS  LQADVLDQNG  NVVAETVAFT780
GDSTIQMMSL  SNGSDLSALE  GQPVRFRFKL  DNGALYSFWV  SKDESGRSDG  YVAGGGPGYD840
GGIDTVGAAA  LSAEKEFSNR  860

Predicted 3D structure by AlphaFold2 with pLDDT = 89.76 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH165(241-848)

MVKKAVLFRG  ASLLCLTLAG  WICSAPISGP  GAKVESLSGA  TVEMFVPGVE  IFSNRRFTLA60
ECPDFLNGIP  FFQEDINTSS  FRVLKDGVIT  VLTPESDHFK  SAQFQALETS  GFTRVEEPPL120
FQLFGDSPAN  KVRIYQKSVK  AGADYTFGKW  VVVLGFEDEQ  IAQINAKKTA  LADALKSAAS180
GPGAGLELTG  GYEADCVDVF  TPGVKLFSNR  DFVLNECPES  LAGQLFLRGN  INGDKFNVVR240
DGTLTVLTPE  SDQFSSAQGG  ALMQEGFQRV  AEPQLFQLFG  DLSANKVGIY  SKKVTAGEQY300
AFGKWTIVLG  FAVAEPWKPK  PWNENEGEVL  YNGIQLPEVW  PPEHIDPRSK  KPMPVPYLDY360
PPEVIPIDVG  RQLLVDDFLI  EKTDLQRTFH  YPEKYEGNPV  LKPENDLEDG  AGSGWAGATP420
KSGGLWWDPD  AQLFKLWYEA  GWLGTICYAT  SKDGIHWDRP  ETDVLSGYNQ  VLPFGLKPDS480
WTVVRDWWTK  DPDAKYKIFV  RGPGGKPEGA  MCFESPDGIH  FGDYTMSGVM  GDRSTMFYNP540
FRKKWVYSLR  SSFRGRSRHY  WEADDFIDGC  KWPDFDLKGA  SWEKGQPVIW  AASDELDPED600
VEVKQGTQLY  NLDAVAYESI  MLGFYQIWRG  PHNHQCFGVP  KITELNFAYS  RDGFHWARPD660
RNTAIESSRE  AGTWDRGYVQ  SLGNICVLRG  DKIWFYYSGF  AGDESRPKGG  MYANSAMGLA720
TLRRDGFASM  DTRLSGELLT  RPVTFSGKYL  FVNADVPDGS  LQADVLDQNG  NVVAETVAFT780
GDSTIQMMSL  SNGSDLSALE  GQPVRFRFKL  DNGALYSFWV  SKDESGRSDG  YVAGGGPGYD840
GGIDTVGAAA  LSAEKEFSNR  860

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help