CAZyme3D

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Entry ID

Information for CAZyme ID: QHC23692.1

Basic Information

GenBank IDQHC23692.1
FamilyCBM13, GH27
Sequence Length605
UniProt IDA0A6I6S2N3(100,100)Download
Average pLDDT?89.23
CAZy50 ID50989
CAZy50 RepNo, QNE16926.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2692234
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. GS7

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTRRRLITGL  CTAVVLAGLG  GTGTTALAGT  AAGRAPADSG  AANTDTPIGQ  KPMMGFNNWA60
RFTCAAQARL  DGTRAGYSFQ  NFMEDQAKAM  KATGLVAAGY  KNLTVDDCWM  QRTSAGYLHG120
AAHWGGSSQP  GFDWELTGYA  DRLHALGMEA  GLYSTSGEKT  CQGVPGGVKG  HEDNDARSLA180
YWGIDSLKLD  NCGTTWSDRQ  QIFTTMAKAL  NTATAGKDRK  ILFNESAPAA  ASGAESVKYK240
TMDWVRGLGQ  MWRVSPDITV  WPKAAWNDPS  AESAYQGGVY  QNFTDTVALA  RYNGVGNHND300
ADMLLIGDNK  QLTLPEQRSQ  FALWSAMGSP  LMISTDVRKM  AAHPEDYQEQ  LAVLKNKDII360
AVDQDPLGAG  GYLASRDNAS  ATAGIDVVVK  PLADGSRAVT  VLNKNSSSVQ  YKLDLARLGF420
GNLSCTRTAR  NLWTHQGSRV  TDSISTTIRG  HDNAMFTVAP  GSCGGAADAV  GQIQSAQSNF480
QKTPFCLDAH  HGATKGAEVA  LWDCTGGANQ  QWRLRGSGLI  SSLQGDGLCV  TGDPTGLRLA540
VCDGSDPHQR  WTYHRSGELR  QATGACVDIN  GGALDDRSAK  VTTYQCGTYQ  PNQTWSAPFT600
APPAA605

Predicted 3D structure by AlphaFold2 with pLDDT = 89.23 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH27(167-436)+CBM13(482-596)

MTRRRLITGL  CTAVVLAGLG  GTGTTALAGT  AAGRAPADSG  AANTDTPIGQ  KPMMGFNNWA60
RFTCAAQARL  DGTRAGYSFQ  NFMEDQAKAM  KATGLVAAGY  KNLTVDDCWM  QRTSAGYLHG120
AAHWGGSSQP  GFDWELTGYA  DRLHALGMEA  GLYSTSGEKT  CQGVPGGVKG  HEDNDARSLA180
YWGIDSLKLD  NCGTTWSDRQ  QIFTTMAKAL  NTATAGKDRK  ILFNESAPAA  ASGAESVKYK240
TMDWVRGLGQ  MWRVSPDITV  WPKAAWNDPS  AESAYQGGVY  QNFTDTVALA  RYNGVGNHND300
ADMLLIGDNK  QLTLPEQRSQ  FALWSAMGSP  LMISTDVRKM  AAHPEDYQEQ  LAVLKNKDII360
AVDQDPLGAG  GYLASRDNAS  ATAGIDVVVK  PLADGSRAVT  VLNKNSSSVQ  YKLDLARLGF420
GNLSCTRTAR  NLWTHQGSRV  TDSISTTIRG  HDNAMFTVAP  GSCGGAADAV  GQIQSAQSNF480
QKTPFCLDAH  HGATKGAEVA  LWDCTGGANQ  QWRLRGSGLI  SSLQGDGLCV  TGDPTGLRLA540
VCDGSDPHQR  WTYHRSGELR  QATGACVDIN  GGALDDRSAK  VTTYQCGTYQ  PNQTWSAPFT600
APPAA605

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help