Information for CAZyme ID: QHB63355.1
Basic Information
| GenBank ID | QHB63355.1 |
| Family | CBM25, CBM26, GH13_28 |
| Sequence Length | 1222 |
| UniProt ID | A0A6I6R0W6(100,100) |
| Average pLDDT? | 80.12 |
| CAZy50 ID | 6336 |
| CAZy50 Rep | No, AXR42240.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1680 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium adolescentis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MMKQSATLAR LSKKTVAFLA AATTLLAGLS LATAAPQQAS AATRDSYADT IGNPTFEAAR | 60 |
| QKYGLPKDMK DGATLHAFEW SFKTIMENIP DIAKAGYTSI QTEPIVKIKD NRKLGTGNWY | 120 |
| LNWYYVYQPT DMSIGNYVVG SEDEFKEMCK LAHQYGLRII VDSVSNHFTS DFDVIEGKWK | 180 |
| NKAYYHEDKQ ISDYNNREDC TQHKLSGLWD LNTQDDTVTE GMHDLLVQTV VDGADGFRYD | 240 |
| AAKHIELSDE VFGGKQSHYW DTILQNGAQY QYGEVLEDAN VREADYADLF NKSSVGGGGI | 300 |
| TDSSYGHEVR NAVQFKNLGA SHFTSHSKVT EDKTVNWVES HDNFANGEAN IPQELSDEWI | 360 |
| KYGWAGVTAQ KNGMSLFFDR PYKDGGTYGT GGVGTYGNGS GPFTENSKLG DVGSDLWKDP | 420 |
| EVVAVNHFRN AMVGEASNVS NCGDDNCLMV ERYAGSAAQD GMVVANANGS DKNLAGQSTK | 480 |
| LANGTYTDEV TGSTITVSGG KVTSGTVKGQ SIAAFSNKTR SGKVSTAEAY PNKGTIPGES | 540 |
| KTITLRSYQS TNTTYSTSDG QSGSFKDGDT IEIGSKAKSD EVVTVTVKGT GADGETIKHT | 600 |
| YSYTKYGDPT YDPSDGTSSP CDKYCMEYMK KNGLDPDCYI DAKEPCHPRN VTVTAIKVSG | 660 |
| DTSMDLASTQ SVQLKADVTT DPAGKRPSVT WTSFDTSVAT VDSKGKVSGL KAGTVKITAT | 720 |
| AGTNKKSDSI TITITGVKPE VSNVIYATKP SGWSKIYAYV YNDTTSKNNG KWPGVEMTQL | 780 |
| TADDSCAKAG TYKYEVPDLG EGKYRVIFTN GSGAQTPGAS QPGIEFSGKV SWNGSSSTVT | 840 |
| AVNCNIQQPI PVSSVSISGS GVSNGKLSLK SGASVQLTAT VNPSNATDKT VSWTSSNSSA | 900 |
| AKVSDGKVTA VKAGTATITA TAGGKTASVV VTVADNPVTS VSISGDGVSG GKLSLKAGAS | 960 |
| AQLTATVKPD DATDRKVTWT SSDSSVANVM GTGVVTAGSK AGKATIKAAA GGKSASVTVT | 1020 |
| VTDVPKQPMT VWYKPASSWK TAKVHYKANG KWTGSAQRMT LYRDGWYRYT IPDTAGGQVR | 1080 |
| MAFTNGSAWD NNGGQGKDYR VSGSVVSVSG GKVSYSAPSF GTPMTVWYKP DSSWKTAKVN | 1140 |
| YQANGKWSGG AQQMEASCGG WYRYTIPDTA GGQVRMAFTD GGSAWDNNGG QGKDYRVSGG | 1200 |
| SVAVAGGQMI TDVTPNCTIT NK | 1222 |
Predicted 3D structure by AlphaFold2 with pLDDT = 80.12 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_28(80-348)+CBM26(745-824)+CBM25(1029-1100)+CBM25(1124-1196)
| MMKQSATLAR LSKKTVAFLA AATTLLAGLS LATAAPQQAS AATRDSYADT IGNPTFEAAR | 60 |
| QKYGLPKDMK DGATLHAFEW SFKTIMENIP DIAKAGYTSI QTEPIVKIKD NRKLGTGNWY | 120 |
| LNWYYVYQPT DMSIGNYVVG SEDEFKEMCK LAHQYGLRII VDSVSNHFTS DFDVIEGKWK | 180 |
| NKAYYHEDKQ ISDYNNREDC TQHKLSGLWD LNTQDDTVTE GMHDLLVQTV VDGADGFRYD | 240 |
| AAKHIELSDE VFGGKQSHYW DTILQNGAQY QYGEVLEDAN VREADYADLF NKSSVGGGGI | 300 |
| TDSSYGHEVR NAVQFKNLGA SHFTSHSKVT EDKTVNWVES HDNFANGEAN IPQELSDEWI | 360 |
| KYGWAGVTAQ KNGMSLFFDR PYKDGGTYGT GGVGTYGNGS GPFTENSKLG DVGSDLWKDP | 420 |
| EVVAVNHFRN AMVGEASNVS NCGDDNCLMV ERYAGSAAQD GMVVANANGS DKNLAGQSTK | 480 |
| LANGTYTDEV TGSTITVSGG KVTSGTVKGQ SIAAFSNKTR SGKVSTAEAY PNKGTIPGES | 540 |
| KTITLRSYQS TNTTYSTSDG QSGSFKDGDT IEIGSKAKSD EVVTVTVKGT GADGETIKHT | 600 |
| YSYTKYGDPT YDPSDGTSSP CDKYCMEYMK KNGLDPDCYI DAKEPCHPRN VTVTAIKVSG | 660 |
| DTSMDLASTQ SVQLKADVTT DPAGKRPSVT WTSFDTSVAT VDSKGKVSGL KAGTVKITAT | 720 |
| AGTNKKSDSI TITITGVKPE VSNVIYATKP SGWSKIYAYV YNDTTSKNNG KWPGVEMTQL | 780 |
| TADDSCAKAG TYKYEVPDLG EGKYRVIFTN GSGAQTPGAS QPGIEFSGKV SWNGSSSTVT | 840 |
| AVNCNIQQPI PVSSVSISGS GVSNGKLSLK SGASVQLTAT VNPSNATDKT VSWTSSNSSA | 900 |
| AKVSDGKVTA VKAGTATITA TAGGKTASVV VTVADNPVTS VSISGDGVSG GKLSLKAGAS | 960 |
| AQLTATVKPD DATDRKVTWT SSDSSVANVM GTGVVTAGSK AGKATIKAAA GGKSASVTVT | 1020 |
| VTDVPKQPMT VWYKPASSWK TAKVHYKANG KWTGSAQRMT LYRDGWYRYT IPDTAGGQVR | 1080 |
| MAFTNGSAWD NNGGQGKDYR VSGSVVSVSG GKVSYSAPSF GTPMTVWYKP DSSWKTAKVN | 1140 |
| YQANGKWSGG AQQMEASCGG WYRYTIPDTA GGQVRMAFTD GGSAWDNNGG QGKDYRVSGG | 1200 |
| SVAVAGGQMI TDVTPNCTIT NK | 1222 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.