Information for CAZyme ID: QGZ37417.1
Basic Information
GenBank ID | QGZ37417.1 |
Family | GT51 |
Sequence Length | 743 |
UniProt ID | A0A857CEY1(100,100)![]() |
Average pLDDT? | 78.90 |
CAZy50 ID | 16925 |
CAZy50 Rep | No, BCP55952.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 538381 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Alphaproteobacteria |
Order | Hyphomicrobiales |
Family | Stappiaceae |
Genus | Stappia |
Species | Stappia indica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRLTGADRPA AGGHAPSSSS PSSSAPARKR APRKAASLES AGNGSGNASG SGSGLGGVSG | 60 |
GRLSGGGGNG SGGKGGGRKG GRGKSRAKRQ RGGISRLLKR GLYWGFVLCI WGGIAGVGVL | 120 |
IYYAAYLPPT SEWKVPQRPP NVRIVAADGT LMANRGDTGG EAVRLEQLPP YLPQAVIAIE | 180 |
DRRFYSHFGL DPLGLGRAVL TNITSGRLVQ GGSTLTQQLA KNLFLEPDRT LRRKVQEAVL | 240 |
ALWLETNYSK DEILEMYLNR VYFGAGAYGV DAAARRYFGK SARLISVSEA ATLAGLLKAP | 300 |
SRYAPTRNPD LAQERATTVL AAMAEEGYLT DTEARDAIAA PLRVVTHHTS ASENYVADWV | 360 |
MELLPGYVGA IEDDIVVDTT IDLGLQIIAE DSLRRALSEE GAKLGVGQGA IVTLDGSGAV | 420 |
KALVGGRDYA QSQFNRAVNA RRQPGSAFKP FVYLAALERG LTPATVRVDE PVKIGKWAPK | 480 |
NYTKTYRGPV TLTEALSLSL NTVAARLAEE VGPRAIIRTA RKLGITSPLA SNLSISLGTS | 540 |
EVTPLEIAAG YTPFSNGGYA VVPHVIRQIR TLEGKVLYAR TGDGAGRVID HATLADMNMM | 600 |
MAQTLTTGTG KIANLPGRPA GGKTGTSQDF RDGWFIGYTG SLTTAVWLGN DDNSPTKRAT | 660 |
GGSLPAKVWK DVMQAGHQGL PVASLPGVSD RPVQVAEPAA APLDMPMRDI PAEGDPSRRL | 720 |
PPMRDSGGGG GGPLDLLNRI FGG | 743 |
Predicted 3D structure by AlphaFold2 with pLDDT = 78.90 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(149-323)
MRLTGADRPA AGGHAPSSSS PSSSAPARKR APRKAASLES AGNGSGNASG SGSGLGGVSG | 60 |
GRLSGGGGNG SGGKGGGRKG GRGKSRAKRQ RGGISRLLKR GLYWGFVLCI WGGIAGVGVL | 120 |
IYYAAYLPPT SEWKVPQRPP NVRIVAADGT LMANRGDTGG EAVRLEQLPP YLPQAVIAIE | 180 |
DRRFYSHFGL DPLGLGRAVL TNITSGRLVQ GGSTLTQQLA KNLFLEPDRT LRRKVQEAVL | 240 |
ALWLETNYSK DEILEMYLNR VYFGAGAYGV DAAARRYFGK SARLISVSEA ATLAGLLKAP | 300 |
SRYAPTRNPD LAQERATTVL AAMAEEGYLT DTEARDAIAA PLRVVTHHTS ASENYVADWV | 360 |
MELLPGYVGA IEDDIVVDTT IDLGLQIIAE DSLRRALSEE GAKLGVGQGA IVTLDGSGAV | 420 |
KALVGGRDYA QSQFNRAVNA RRQPGSAFKP FVYLAALERG LTPATVRVDE PVKIGKWAPK | 480 |
NYTKTYRGPV TLTEALSLSL NTVAARLAEE VGPRAIIRTA RKLGITSPLA SNLSISLGTS | 540 |
EVTPLEIAAG YTPFSNGGYA VVPHVIRQIR TLEGKVLYAR TGDGAGRVID HATLADMNMM | 600 |
MAQTLTTGTG KIANLPGRPA GGKTGTSQDF RDGWFIGYTG SLTTAVWLGN DDNSPTKRAT | 660 |
GGSLPAKVWK DVMQAGHQGL PVASLPGVSD RPVQVAEPAA APLDMPMRDI PAEGDPSRRL | 720 |
PPMRDSGGGG GGPLDLLNRI FGG | 743 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.