CAZyme3D

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Entry ID

Information for CAZyme ID: QGY66659.1

Basic Information

GenBank IDQGY66659.1
FamilyGH51
Sequence Length868
UniProt IDA0A6I6KNX4(100,100)Download
Average pLDDT?91.84
CAZy50 ID11215
CAZy50 RepNo, QNA71172.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1421017
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rimosus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MASDDQRPGA  VPGGPGRRTV  IAALGATALT  EALRTGAAPP  AAAEPGPALP  APAAHWTFEE60
GRGTTAADSS  GHGRTLTLRG  GAAWGDGHTG  HGLALAGRAC  ATAAGPAVDT  AHGFTLTARV120
RLTATDGFHT  AVALDGTAVS  ACYLQLRDDT  RAFAFTRLPR  DAADANGAAV  IAGAGFAPEA180
GRWYHLAGVA  DAAAGLLRLY  VDGVLEGEVP  APGGWRATGA  TTVGRGLFGG  AEADHFQGGI240
DDVRCYDTAL  SGAQIARLAG  VPERDTTPLL  TIDARRPGPT  VPSRLGGIFF  EDINHSGEGG300
LYAELVSNRS  FMADPRAPLH  WSALGGATIA  LDPTAPLNEA  LTRSLRITVR  GPGSGAANDG360
YWGIPVRPAT  TYRASYFAKA  DGHTGPLTLA  LTGTDGTVYA  RTAAPAPGRD  WRRYDLTLRT420
PPTAPATMEA  RLTVTTAGTT  GTTGTLWLTQ  VSLFPPTYRN  RPNGLRPDLM  AALAALRPAF480
LRFPGGNYLE  GNVIADRFDW  KKTIGPVERR  PGHRNSAWGY  WSTDGLGLPE  YLQMAEDLDC540
EPVLCVYAGY  SLKGEHVTGE  ALRPFVQDAL  DQIEYITGPA  TSPWGARRAA  DGHPAPYPLT600
YVEVGNEDWF  DTSGSYEERY  AAFHDALTRT  YPHLKLIATT  PVRSRPYDLI  DEHYYRSPAA660
FAAGAHLYDR  RDRATPKVFV  GEWAAQEGRP  TPNLRAALGD  AAWLTGILRN  SDHVVMSCYA720
PLFSHVRDNI  WATNLIAYDG  LTSYHSPSSY  AQQLLRSHRG  DTVLPTEVRA  LPGLSAVTTR780
DHRTGRLYVA  VVNTGGTPRT  TSVRIDGIRT  IEPSGRAEIL  SGPGPEATNT  LSDPTAVVPR840
SVPLNGLGTR  FTYTFPAYSV  TVLRLHGG868

Predicted 3D structure by AlphaFold2 with pLDDT = 91.84 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH51(445-865)

MASDDQRPGA  VPGGPGRRTV  IAALGATALT  EALRTGAAPP  AAAEPGPALP  APAAHWTFEE60
GRGTTAADSS  GHGRTLTLRG  GAAWGDGHTG  HGLALAGRAC  ATAAGPAVDT  AHGFTLTARV120
RLTATDGFHT  AVALDGTAVS  ACYLQLRDDT  RAFAFTRLPR  DAADANGAAV  IAGAGFAPEA180
GRWYHLAGVA  DAAAGLLRLY  VDGVLEGEVP  APGGWRATGA  TTVGRGLFGG  AEADHFQGGI240
DDVRCYDTAL  SGAQIARLAG  VPERDTTPLL  TIDARRPGPT  VPSRLGGIFF  EDINHSGEGG300
LYAELVSNRS  FMADPRAPLH  WSALGGATIA  LDPTAPLNEA  LTRSLRITVR  GPGSGAANDG360
YWGIPVRPAT  TYRASYFAKA  DGHTGPLTLA  LTGTDGTVYA  RTAAPAPGRD  WRRYDLTLRT420
PPTAPATMEA  RLTVTTAGTT  GTTGTLWLTQ  VSLFPPTYRN  RPNGLRPDLM  AALAALRPAF480
LRFPGGNYLE  GNVIADRFDW  KKTIGPVERR  PGHRNSAWGY  WSTDGLGLPE  YLQMAEDLDC540
EPVLCVYAGY  SLKGEHVTGE  ALRPFVQDAL  DQIEYITGPA  TSPWGARRAA  DGHPAPYPLT600
YVEVGNEDWF  DTSGSYEERY  AAFHDALTRT  YPHLKLIATT  PVRSRPYDLI  DEHYYRSPAA660
FAAGAHLYDR  RDRATPKVFV  GEWAAQEGRP  TPNLRAALGD  AAWLTGILRN  SDHVVMSCYA720
PLFSHVRDNI  WATNLIAYDG  LTSYHSPSSY  AQQLLRSHRG  DTVLPTEVRA  LPGLSAVTTR780
DHRTGRLYVA  VVNTGGTPRT  TSVRIDGIRT  IEPSGRAEIL  SGPGPEATNT  LSDPTAVVPR840
SVPLNGLGTR  FTYTFPAYSV  TVLRLHGG868

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help