Information for CAZyme ID: QGW66163.1
Basic Information
| GenBank ID | QGW66163.1 |
| Family | GH3 |
| Sequence Length | 897 |
| UniProt ID | A0A6I6GWQ2(100,100) |
| Average pLDDT? | 88.41 |
| CAZy50 ID | 19403 |
| CAZy50 Rep | No, ALN90811.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 453783 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Xanthomonadales |
| Family | Xanthomonadaceae |
| Genus | Lysobacter |
| Species | Lysobacter soli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRWRSSRRSR NSSTATARPR RKCGARGGRR SRHDDIARHT GGGTVKAGNL GRIGSGVLVS | 60 |
| ALLLALAACK GDDRPQAGAQ PQAGASPWPE VKWPLPEDPA LEKRVNDLLA SMTVEEKVGQ | 120 |
| IVQGDISSIT PEDVRTYHLG SVLAGGNSDP GGRYNATPAE WLALADAFYE ASIDKSKGGK | 180 |
| GIPVMFGIDA VHGQSNIVGA TIFPHNIALG ATRNPELLRR IGEITALETR TTGMEWAFAP | 240 |
| TVAVPQDDRW GRSYEGYSES PEVVASFAGA MVEGLQGKVG TKEFLDGRHV ISSVKHFLGD | 300 |
| GGTTNGEDQG DTKLSEADLV RIHAAGYPPA IAAGAQSVMA SFNSVNGVKM HGNKAFLTDA | 360 |
| LKGRMNFGGF VVGDWNGHGQ VDGCTPSDCP ATINAGLDMA MAPDSWKGFY DTALAAAKAG | 420 |
| TISQERLDDA VRRILRVKFR LGLFEAGKPS QRAVGGKFEL LGAPEHRAVA RQAVRESLVL | 480 |
| LKNQGGVLPL DPRKRILVAG SGANDMTKQV GGWTYSWQGS GSKREDFPNA DTIFEGIAQQ | 540 |
| AKAAGGEATM AVDGKFTQKP DVAVVVFGED PYAEFQGDIP NLMYRPGDDS DLELIKRLKA | 600 |
| AGIPVVSVFL SGRPLWMNRE INASDAFVAA WLPGSEGAGV ADVILRKADG SVQNDFKGKL | 660 |
| GFSWPRTAIQ VANNVGQKDY DPQFAFGFGL TYADDGNLAP LPEESGVKPG QTEAGTFYAR | 720 |
| GTLADGLRLR LGNAAGQNVD VTTLPAKLPD GSLAVTAVDH EAQEDARRLD WSGAQAATAT | 780 |
| LLTDKPMNLM RETNGEVMIV LTTRLEAAPA GDVSVGVTCG AGCKPASLPA RDALAKLPAG | 840 |
| QWTTFGVPLK CLATAGADMR KLDSVLVLES KGKLQMSVSR IALGASNEAE HVLPCKW | 897 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.41 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(180-401)
| MRWRSSRRSR NSSTATARPR RKCGARGGRR SRHDDIARHT GGGTVKAGNL GRIGSGVLVS | 60 |
| ALLLALAACK GDDRPQAGAQ PQAGASPWPE VKWPLPEDPA LEKRVNDLLA SMTVEEKVGQ | 120 |
| IVQGDISSIT PEDVRTYHLG SVLAGGNSDP GGRYNATPAE WLALADAFYE ASIDKSKGGK | 180 |
| GIPVMFGIDA VHGQSNIVGA TIFPHNIALG ATRNPELLRR IGEITALETR TTGMEWAFAP | 240 |
| TVAVPQDDRW GRSYEGYSES PEVVASFAGA MVEGLQGKVG TKEFLDGRHV ISSVKHFLGD | 300 |
| GGTTNGEDQG DTKLSEADLV RIHAAGYPPA IAAGAQSVMA SFNSVNGVKM HGNKAFLTDA | 360 |
| LKGRMNFGGF VVGDWNGHGQ VDGCTPSDCP ATINAGLDMA MAPDSWKGFY DTALAAAKAG | 420 |
| TISQERLDDA VRRILRVKFR LGLFEAGKPS QRAVGGKFEL LGAPEHRAVA RQAVRESLVL | 480 |
| LKNQGGVLPL DPRKRILVAG SGANDMTKQV GGWTYSWQGS GSKREDFPNA DTIFEGIAQQ | 540 |
| AKAAGGEATM AVDGKFTQKP DVAVVVFGED PYAEFQGDIP NLMYRPGDDS DLELIKRLKA | 600 |
| AGIPVVSVFL SGRPLWMNRE INASDAFVAA WLPGSEGAGV ADVILRKADG SVQNDFKGKL | 660 |
| GFSWPRTAIQ VANNVGQKDY DPQFAFGFGL TYADDGNLAP LPEESGVKPG QTEAGTFYAR | 720 |
| GTLADGLRLR LGNAAGQNVD VTTLPAKLPD GSLAVTAVDH EAQEDARRLD WSGAQAATAT | 780 |
| LLTDKPMNLM RETNGEVMIV LTTRLEAAPA GDVSVGVTCG AGCKPASLPA RDALAKLPAG | 840 |
| QWTTFGVPLK CLATAGADMR KLDSVLVLES KGKLQMSVSR IALGASNEAE HVLPCKW | 897 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.