CAZyme3D

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Entry ID

Information for CAZyme ID: QGR15819.1

Basic Information

GenBank IDQGR15819.1
FamilyGT4
Sequence Length355
UniProt IDA0A650CDG7(100,100)Download
Average pLDDT?90.36
CAZy50 ID128606
CAZy50 RepNo, AOL15808.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID69656
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSulfurisphaera
SpeciesSulfurisphaera ohwakuensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MEEIKVAVIA  HGLGMSRGYS  GEGYVYKNVF  ELLKEKNINF  VAVSFSKPYD  TSLNSIYSLP60
FHLPKFDKYQ  RLLVYFTAKK  VKPKLFFNAS  GILIPLSNIA  PHIIYAGAPA  ISSVPSKYTR120
SFFWRLYLLP  FRIIISRIKD  EAKKATIIAN  SLYSARAIAK  VFEIPQPQVI  YPPVDVEFYS180
KAFENEDRES  VFVTIARFER  GKMIENAIKF  SHLSGIKGIV  IGSLNDKRYY  KELVRLRDRL240
NADIKFLPNL  PREEVLKILS  KAKLYFHPTI  GEHFGIPIIE  AMASGVVPIV  PKESGGSEIV300
PQFSYDNLED  AVRIGKEIIE  KYSNNLRKEM  HEKAIMFDKN  NFKEKIYDVI  SKYLM355

Predicted 3D structure by AlphaFold2 with pLDDT = 90.36 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT4(185-300)

MEEIKVAVIA  HGLGMSRGYS  GEGYVYKNVF  ELLKEKNINF  VAVSFSKPYD  TSLNSIYSLP60
FHLPKFDKYQ  RLLVYFTAKK  VKPKLFFNAS  GILIPLSNIA  PHIIYAGAPA  ISSVPSKYTR120
SFFWRLYLLP  FRIIISRIKD  EAKKATIIAN  SLYSARAIAK  VFEIPQPQVI  YPPVDVEFYS180
KAFENEDRES  VFVTIARFER  GKMIENAIKF  SHLSGIKGIV  IGSLNDKRYY  KELVRLRDRL240
NADIKFLPNL  PREEVLKILS  KAKLYFHPTI  GEHFGIPIIE  AMASGVVPIV  PKESGGSEIV300
PQFSYDNLED  AVRIGKEIIE  KYSNNLRKEM  HEKAIMFDKN  NFKEKIYDVI  SKYLM355

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help