Information for CAZyme ID: QGK72028.1
Basic Information
| GenBank ID | QGK72028.1 |
| Family | GH172 |
| Sequence Length | 823 |
| UniProt ID | A0A5Q3QBV5(100,100) |
| Average pLDDT? | 92.34 |
| CAZy50 ID | 19436 |
| CAZy50 Rep | No, SDM15504.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2665642 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Allosaccharopolyspora |
| Species | Allosaccharopolyspora coralli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MVTPAAGIDG DTAQAQTDPG ASASAVGWDT YRNIDGFSQL RGQERSRQFS SFADDGSNND | 60 |
| GFQGTYSCLR QSDRGCVIAE REGAGEVSSI WLTREPWGDV TGTGNITIEL DGRTVLDAPL | 120 |
| IDVVSGEVGA PFVWPLVGNP EDAAGGVVIK VPMPYRESMR ITTDENPFFY HVDYRTFPSA | 180 |
| DGVRTFDPAD PATDVLNKLR RFGVADPKTT ADNTDTTRQD FTLPPGGSTE IAAVDGPAQI | 240 |
| NQLRLRLPQV VPSPRVVDDG RAFGAAGGSS FRMAVAPENE GIRIVRRFDP QIADQVASLS | 300 |
| VDGVPAGEWR SGAAQPGGWG VQAIEVDPAI TQGKSSVQID NRFVSSSLDV NEFRYDVQSK | 360 |
| VNGEWVRTDV LDLGPGHPGE EQAHGYRIDN PVFAREKLVG RYGFSEQEVA ASKTLLDTLR | 420 |
| LRITFDGKTT VDSPVGEFFG SGLGEHDVRT LMSSIDPGQD GWYTAWWPMP FSSDAKVELV | 480 |
| NTGPVALETG TGEVSTAAAD IDTDTGYFNT TSRRGLTTPG EDWNFMNAEG SGTFYGVTHT | 540 |
| MRGLIPPNST RESTDLQPLS REDPVSNQRN YLEGDERFFV DGSSTPAWYG TGSEDYYESG | 600 |
| WYFRAGTTFS MPLAGNPAHE INGDGCQYDC TGAYRLQVPD AVPFSDGMVA GIEHGPANDE | 660 |
| PGDYSSTAYW YGGNPSSHTE TDVVDVADPA DRESHQYTAA GENLEDLTSR FEGDQNNQPF | 720 |
| TRTTTTATGP VSFTVGVDAD NEGVRLRRLS DQIAAYQQAD VFVDGAPAGS WMQPLGNGTD | 780 |
| RWLEDHFDVP AELTQGKEQV RVEIIPRGDA PPWSASRYTV FSR | 823 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.34 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH172(418-671)
| MVTPAAGIDG DTAQAQTDPG ASASAVGWDT YRNIDGFSQL RGQERSRQFS SFADDGSNND | 60 |
| GFQGTYSCLR QSDRGCVIAE REGAGEVSSI WLTREPWGDV TGTGNITIEL DGRTVLDAPL | 120 |
| IDVVSGEVGA PFVWPLVGNP EDAAGGVVIK VPMPYRESMR ITTDENPFFY HVDYRTFPSA | 180 |
| DGVRTFDPAD PATDVLNKLR RFGVADPKTT ADNTDTTRQD FTLPPGGSTE IAAVDGPAQI | 240 |
| NQLRLRLPQV VPSPRVVDDG RAFGAAGGSS FRMAVAPENE GIRIVRRFDP QIADQVASLS | 300 |
| VDGVPAGEWR SGAAQPGGWG VQAIEVDPAI TQGKSSVQID NRFVSSSLDV NEFRYDVQSK | 360 |
| VNGEWVRTDV LDLGPGHPGE EQAHGYRIDN PVFAREKLVG RYGFSEQEVA ASKTLLDTLR | 420 |
| LRITFDGKTT VDSPVGEFFG SGLGEHDVRT LMSSIDPGQD GWYTAWWPMP FSSDAKVELV | 480 |
| NTGPVALETG TGEVSTAAAD IDTDTGYFNT TSRRGLTTPG EDWNFMNAEG SGTFYGVTHT | 540 |
| MRGLIPPNST RESTDLQPLS REDPVSNQRN YLEGDERFFV DGSSTPAWYG TGSEDYYESG | 600 |
| WYFRAGTTFS MPLAGNPAHE INGDGCQYDC TGAYRLQVPD AVPFSDGMVA GIEHGPANDE | 660 |
| PGDYSSTAYW YGGNPSSHTE TDVVDVADPA DRESHQYTAA GENLEDLTSR FEGDQNNQPF | 720 |
| TRTTTTATGP VSFTVGVDAD NEGVRLRRLS DQIAAYQQAD VFVDGAPAGS WMQPLGNGTD | 780 |
| RWLEDHFDVP AELTQGKEQV RVEIIPRGDA PPWSASRYTV FSR | 823 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.