CAZyme3D

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Entry ID

Information for CAZyme ID: QFG70032.1

Basic Information

GenBank IDQFG70032.1
FamilyGT51
Sequence Length779
UniProt IDA0A5J6VAB3(100,100)Download
Average pLDDT?79.79
CAZy50 ID29165
CAZy50 RepNo, USQ80071.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2593973
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyOrnithinimicrobiaceae
GenusOrnithinimicrobium
SpeciesOrnithinimicrobium pratense

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSSSRTAPPA  RRSGRSAPRQ  RRGWVRRTLL  WLGALALLGL  LLAIGLFAWA  YSRTDIPEPN60
DFAEAQSSIL  YYADGETELA  RFTGGFDRES  VPLSEVPEHV  RYAVLAAEDR  TFYENEGVSI120
TGTARGAWRT  LTGDGLQGGS  TITQQYVKNY  YLSPDQTLSR  KVEELFIALK  IDNELAKDQI180
LENYLNTIYY  GRGAYGIQTA  SQAYFRKDIS  ELTVEEGAFL  AAATNAPSLY  DPDFADGNQE240
RAETRVAYVL  DGMVEEGWLD  ASERSGLSFP  DIEDTPPATA  VQGVDGYISQ  AAREELRSRV300
GLEDTLLDGG  GLRITTTIVQ  QHQEAAQEAV  EAFRPTGAGT  DDITTALTSV  RPGDGAITAM360
YGGEDYQETQ  LNAVTDARVQ  AGSLFKPITL  AAAVAEGVDT  LQPYPGPSPM  TFDWHGDEVE420
VANFQNLSYG  LLDLRAALAD  SVNTVYVQLN  QEIGPELTAE  AAVELGLPDD  TPGLSDDLTN480
VLGTASPTLL  EMTNVYATLA  AEGERATPYL  IAAVSTVDGE  QTYEADPELA  RGVERDVAVD540
VTDAMTAVMT  QGSGMAAGDL  GRPSAGKTGT  SERNVSAWFD  GFVPQLAAGV  VMYKGDGTVP600
MQDVAGVEQI  TGGTFPAEVW  GEFMRLAMEG  EEVLEFSPRV  GTGGPTDDTV  VTAEPTVEVE660
PTTGAPAPTE  TEAPTETETP  TETEEPTETE  EPTETPTETE  EPTSPEPTTP  EPTSPEPTQP720
EPTSPQPTQP  TQPEPTSPQP  TQPGPTSPAP  IDPPGDEDGG  GTDGGGDGAG  PAPVPSPTG779

Predicted 3D structure by AlphaFold2 with pLDDT = 79.79 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(79-254)

MSSSRTAPPA  RRSGRSAPRQ  RRGWVRRTLL  WLGALALLGL  LLAIGLFAWA  YSRTDIPEPN60
DFAEAQSSIL  YYADGETELA  RFTGGFDRES  VPLSEVPEHV  RYAVLAAEDR  TFYENEGVSI120
TGTARGAWRT  LTGDGLQGGS  TITQQYVKNY  YLSPDQTLSR  KVEELFIALK  IDNELAKDQI180
LENYLNTIYY  GRGAYGIQTA  SQAYFRKDIS  ELTVEEGAFL  AAATNAPSLY  DPDFADGNQE240
RAETRVAYVL  DGMVEEGWLD  ASERSGLSFP  DIEDTPPATA  VQGVDGYISQ  AAREELRSRV300
GLEDTLLDGG  GLRITTTIVQ  QHQEAAQEAV  EAFRPTGAGT  DDITTALTSV  RPGDGAITAM360
YGGEDYQETQ  LNAVTDARVQ  AGSLFKPITL  AAAVAEGVDT  LQPYPGPSPM  TFDWHGDEVE420
VANFQNLSYG  LLDLRAALAD  SVNTVYVQLN  QEIGPELTAE  AAVELGLPDD  TPGLSDDLTN480
VLGTASPTLL  EMTNVYATLA  AEGERATPYL  IAAVSTVDGE  QTYEADPELA  RGVERDVAVD540
VTDAMTAVMT  QGSGMAAGDL  GRPSAGKTGT  SERNVSAWFD  GFVPQLAAGV  VMYKGDGTVP600
MQDVAGVEQI  TGGTFPAEVW  GEFMRLAMEG  EEVLEFSPRV  GTGGPTDDTV  VTAEPTVEVE660
PTTGAPAPTE  TEAPTETETP  TETEEPTETE  EPTETPTETE  EPTSPEPTTP  EPTSPEPTQP720
EPTSPQPTQP  TQPEPTSPQP  TQPGPTSPAP  IDPPGDEDGG  GTDGGGDGAG  PAPVPSPTG779

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help