Information for CAZyme ID: QEY60324.1
Basic Information
| GenBank ID | QEY60324.1 |
| Family | GT2 |
| Sequence Length | 862 |
| UniProt ID | A0A5J6Q521(100,100) |
| Average pLDDT? | 85.23 |
| CAZy50 ID | 2859 |
| CAZy50 Rep | No, ASO85436.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2604941 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. C27(2019) |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIQRHKLPEL SQQYRNARGQ QMGSITAALF VCVKMLAYMF LRLEDQAWQQ LWQRYQPWFK | 60 |
| HLTQRPYQPA DPLRYTLQVI WLVFVRIPTA QTVWYVAYLK KTRSRILRWR RYLGRFLARG | 120 |
| IKPAVAQSPL RHAFANPRHL MQHIAKSRLK KAIFYVFVAV LMCLAVLLVT QPFSLLAQFI | 180 |
| FVVLLWGAAM LVRRIPGRFP TLLLIVLSLT VSARYIWWRY TSTLNWNSNV DLLFGLILLA | 240 |
| AETYSWVVLV MSYIQTAWPL DRKVAPLPAD RALWPTVDLM IPTYNEDLSV IKPTVYAALG | 300 |
| MDWPADKLRI HLLDDGRRDA LREFAEEAGI GYIVRTGNRH AKAGNLNNAL QQTEADLVAI | 360 |
| FDCDHVPSRS FLQLTVGWFL RDEKLALVQT PHHFFSADPF ERNLDHYGKQ PNENALFYGL | 420 |
| IQDGNDLWNA AFFCGSCAVL KRSAVESIGG FAVETVTEDA HTALRLHRAG YNSAYLRIPM | 480 |
| AAGLATESLS AHIGQRIRWA RGMAQIFRTD NPMLGKGLNL FQRLCYVNAM MHFLAGIPRI | 540 |
| IYLTAPLAFL LFHSYIIYAP AIAIMLYVLP HMIHASITNS ATQGAYRRTF WGEIYETVLS | 600 |
| WYIARPTTVA LFSPNKGQFN VTEKGGLIEH EYFDWKMAKP YVLLALLNFL GVAFGIWRLW | 660 |
| SGPVDEHATV IITMLWVAYN LIVLGAAVGV AAEVRQTRHS HRITTNLPVD LIDTDGYMYS | 720 |
| GTLTDYSDAG VGVKLADTAL LKVGALVDLI LVRGARQFSF PGRVSRSIDE SVGIHFKTLS | 780 |
| KQQQIDFVQC TFARADAWLT HNRDFSLDRP MQSFIDVVLL SVSGYQHLAK YLPFPLSRLV | 840 |
| KWLTQLVAWV LSFLPRNHPI TY | 862 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.23 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT2(280-448)
| MIQRHKLPEL SQQYRNARGQ QMGSITAALF VCVKMLAYMF LRLEDQAWQQ LWQRYQPWFK | 60 |
| HLTQRPYQPA DPLRYTLQVI WLVFVRIPTA QTVWYVAYLK KTRSRILRWR RYLGRFLARG | 120 |
| IKPAVAQSPL RHAFANPRHL MQHIAKSRLK KAIFYVFVAV LMCLAVLLVT QPFSLLAQFI | 180 |
| FVVLLWGAAM LVRRIPGRFP TLLLIVLSLT VSARYIWWRY TSTLNWNSNV DLLFGLILLA | 240 |
| AETYSWVVLV MSYIQTAWPL DRKVAPLPAD RALWPTVDLM IPTYNEDLSV IKPTVYAALG | 300 |
| MDWPADKLRI HLLDDGRRDA LREFAEEAGI GYIVRTGNRH AKAGNLNNAL QQTEADLVAI | 360 |
| FDCDHVPSRS FLQLTVGWFL RDEKLALVQT PHHFFSADPF ERNLDHYGKQ PNENALFYGL | 420 |
| IQDGNDLWNA AFFCGSCAVL KRSAVESIGG FAVETVTEDA HTALRLHRAG YNSAYLRIPM | 480 |
| AAGLATESLS AHIGQRIRWA RGMAQIFRTD NPMLGKGLNL FQRLCYVNAM MHFLAGIPRI | 540 |
| IYLTAPLAFL LFHSYIIYAP AIAIMLYVLP HMIHASITNS ATQGAYRRTF WGEIYETVLS | 600 |
| WYIARPTTVA LFSPNKGQFN VTEKGGLIEH EYFDWKMAKP YVLLALLNFL GVAFGIWRLW | 660 |
| SGPVDEHATV IITMLWVAYN LIVLGAAVGV AAEVRQTRHS HRITTNLPVD LIDTDGYMYS | 720 |
| GTLTDYSDAG VGVKLADTAL LKVGALVDLI LVRGARQFSF PGRVSRSIDE SVGIHFKTLS | 780 |
| KQQQIDFVQC TFARADAWLT HNRDFSLDRP MQSFIDVVLL SVSGYQHLAK YLPFPLSRLV | 840 |
| KWLTQLVAWV LSFLPRNHPI TY | 862 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.