Information for CAZyme ID: QEV98723.1
Basic Information
| GenBank ID | QEV98723.1 |
| Family | GH13_30 |
| Sequence Length | 564 |
| UniProt ID | A0A5J6KRH8(100,100) |
| Average pLDDT? | 94.19 |
| CAZy50 ID | 33390 |
| CAZy50 Rep | No, AZG43962.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2614638 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Microbacterium |
| Species | Microbacterium caowuchunii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTSTPDAASP VPAADAFTPA PGSEWWRTAV IYQIYPRSFA DSDGDGLGDL PGITSRLGAL | 60 |
| ADLGVDAIWL SPFMVSPQKD AGYDVADYCD VDPLFGTLAD FDAMLERAHG LDIRVIVDLV | 120 |
| PNHSSDQHVW FQEALRSAPG SRERARYIFR DGRGENGELP PNNWESVFGG PMWDRVTEPD | 180 |
| GTPGQWYLHI FDSSQPDFDW TNPEVREEFR RILRFWLDRG VDGFRVDVAH GLIKKDGLPD | 240 |
| YTPADDADSM GGEEQDVPYW GQPGVHDVYR DWHLVLEEYP GHRALCAEAW LPTPDKTALW | 300 |
| VRPDEMHQAF NFPYAMTEWD AAALRTVITD SLRAFPAVGA PATWVLSNHD VIRHASRLAL | 360 |
| TAPSPQGEGI GPDSVAQPIP ELGLRRARAA TTVMLALPGS AYLYQGEELG LPEAIDIPDD | 420 |
| ARQDPTWFRT NHEKYGRDGC RVPIPWEAGA PAYGFNQTGL AWLPQPATWA DYARDVQEGD | 480 |
| ARSTLELYKH LLAERRAHEL ATAPLAWLDG YPDDVLAFQV GTITVIANTG PAPVELPAGR | 540 |
| ILVASEPFEG RELPADTAVW LTTD | 564 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.19 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_30(48-413)
| MTSTPDAASP VPAADAFTPA PGSEWWRTAV IYQIYPRSFA DSDGDGLGDL PGITSRLGAL | 60 |
| ADLGVDAIWL SPFMVSPQKD AGYDVADYCD VDPLFGTLAD FDAMLERAHG LDIRVIVDLV | 120 |
| PNHSSDQHVW FQEALRSAPG SRERARYIFR DGRGENGELP PNNWESVFGG PMWDRVTEPD | 180 |
| GTPGQWYLHI FDSSQPDFDW TNPEVREEFR RILRFWLDRG VDGFRVDVAH GLIKKDGLPD | 240 |
| YTPADDADSM GGEEQDVPYW GQPGVHDVYR DWHLVLEEYP GHRALCAEAW LPTPDKTALW | 300 |
| VRPDEMHQAF NFPYAMTEWD AAALRTVITD SLRAFPAVGA PATWVLSNHD VIRHASRLAL | 360 |
| TAPSPQGEGI GPDSVAQPIP ELGLRRARAA TTVMLALPGS AYLYQGEELG LPEAIDIPDD | 420 |
| ARQDPTWFRT NHEKYGRDGC RVPIPWEAGA PAYGFNQTGL AWLPQPATWA DYARDVQEGD | 480 |
| ARSTLELYKH LLAERRAHEL ATAPLAWLDG YPDDVLAFQV GTITVIANTG PAPVELPAGR | 540 |
| ILVASEPFEG RELPADTAVW LTTD | 564 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.