CAZyme3D

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Entry ID

Information for CAZyme ID: QEV26304.1

Basic Information

GenBank IDQEV26304.1
FamilyCE8, PL1
Sequence Length686
UniProt IDA0A5J6I4Y1(100,100)Download
Average pLDDT?89.32
CAZy50 ID36046
CAZy50 RepNo, QEV07100.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID116188
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces coeruleorubidus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSELRSKPRH  RRSRTALAVG  VPLALTAAGT  LAYGTDLGVL  GSTARQASAA  APAWAADTAD60
GFASVNSLGQ  KGTYGGRDGK  TVTVKTQADL  EKYATAAEPY  VIVVAGTINM  NPVGKEIKVQ120
SDKTIVGSGT  SGHIVGGGFF  LGQGVHNVII  RNLTIRDSYK  GVWNDKDHDF  DAIQMDGAHH180
VWIDHNDLRH  MADGLIDVRK  DSTNVTVSWN  KLSDNNKTFG  IGWTENVKTD  ITIHHNWIRE240
TEQRNPSTDN  AAHAHLYNNF  LEDAPGTDIK  SSYGNYSRGA  TKMVLENSLF  QGVKNPVIKD300
SGAAVVQRGN  SFSGTSGRNE  SGGTAFDPKA  YYPYTLDKAA  DLPSILKSGA  GPRTSIGTTA360
AASTKAAAAT  TLTVAKDGSG  QYTTVQAAVN  AVPANNPSRV  VIAVKPGTYR  ELVKVPSNKP420
HVTIQGTGGS  RKDTTIVYNN  ASGTPKPGGG  TYGTGGSATV  AVEADDFQAR  NLTISNNFDE480
KANQQLSGHQ  AVALRTAADK  VFLDGIIVSG  DQDTLLLDTA  AKDRLGRVYV  SNSYVIGNVD540
FIFGRATAVV  DRSVITLKKR  WDGTSAGYVT  APSTAANRKG  ILIANSTVNG  DVSGGSFYLG600
RPWHAGGDAS  LDPQTTVRNT  SLSAAIKSTP  WTDMSGFSWK  DDRFAEYKNT  GAGAGAASTN660
RPHLTDAQAA  NQEVADWLAG  WTPSAS686

Predicted 3D structure by AlphaFold2 with pLDDT = 89.32 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL1(111-291)+CE8(372-678)

MSELRSKPRH  RRSRTALAVG  VPLALTAAGT  LAYGTDLGVL  GSTARQASAA  APAWAADTAD60
GFASVNSLGQ  KGTYGGRDGK  TVTVKTQADL  EKYATAAEPY  VIVVAGTINM  NPVGKEIKVQ120
SDKTIVGSGT  SGHIVGGGFF  LGQGVHNVII  RNLTIRDSYK  GVWNDKDHDF  DAIQMDGAHH180
VWIDHNDLRH  MADGLIDVRK  DSTNVTVSWN  KLSDNNKTFG  IGWTENVKTD  ITIHHNWIRE240
TEQRNPSTDN  AAHAHLYNNF  LEDAPGTDIK  SSYGNYSRGA  TKMVLENSLF  QGVKNPVIKD300
SGAAVVQRGN  SFSGTSGRNE  SGGTAFDPKA  YYPYTLDKAA  DLPSILKSGA  GPRTSIGTTA360
AASTKAAAAT  TLTVAKDGSG  QYTTVQAAVN  AVPANNPSRV  VIAVKPGTYR  ELVKVPSNKP420
HVTIQGTGGS  RKDTTIVYNN  ASGTPKPGGG  TYGTGGSATV  AVEADDFQAR  NLTISNNFDE480
KANQQLSGHQ  AVALRTAADK  VFLDGIIVSG  DQDTLLLDTA  AKDRLGRVYV  SNSYVIGNVD540
FIFGRATAVV  DRSVITLKKR  WDGTSAGYVT  APSTAANRKG  ILIANSTVNG  DVSGGSFYLG600
RPWHAGGDAS  LDPQTTVRNT  SLSAAIKSTP  WTDMSGFSWK  DDRFAEYKNT  GAGAGAASTN660
RPHLTDAQAA  NQEVADWLAG  WTPSAS686

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help