CAZyme3D

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Entry ID

Information for CAZyme ID: QEU85221.1

Basic Information

GenBank IDQEU85221.1
FamilyGH46
Sequence Length300
UniProt IDA0A5J6FUP2(100,100)Download
Average pLDDT?88.20
CAZy50 ID117592
CAZy50 RepNo, UUN30379.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID665577
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces viridosporus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRSGALLLA  AAPVIATAVY  FAMPTDSADA  PAAPPAATAQ  AAREDAKDRA  EEERAEDDAL60
IAGLPAGLAA  PEKKELAQRL  VASVQNSTLD  WRSLYGSIED  HGDGQGYTAG  IIGFCSGTHD120
LLMLVEHYSE  EHPGNGLERY  LPALREVDGT  DSHEGLDPGF  TAAWRAEAEL  PEFRRAQEEM180
RDRLYFEPAV  RLAKLDGLDT  LGQFVYYDAM  VFHGPDTDPE  GFYGLRERVM  EKARTPARGG240
SEKAYLDAFL  DVRREAMLTK  RPGSDTSRVD  TAQRRFLEAG  NLKLDTPLVW  RAYGGTFRVP300
300

Predicted 3D structure by AlphaFold2 with pLDDT = 88.20 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH46(67-284)

MKRSGALLLA  AAPVIATAVY  FAMPTDSADA  PAAPPAATAQ  AAREDAKDRA  EEERAEDDAL60
IAGLPAGLAA  PEKKELAQRL  VASVQNSTLD  WRSLYGSIED  HGDGQGYTAG  IIGFCSGTHD120
LLMLVEHYSE  EHPGNGLERY  LPALREVDGT  DSHEGLDPGF  TAAWRAEAEL  PEFRRAQEEM180
RDRLYFEPAV  RLAKLDGLDT  LGQFVYYDAM  VFHGPDTDPE  GFYGLRERVM  EKARTPARGG240
SEKAYLDAFL  DVRREAMLTK  RPGSDTSRVD  TAQRRFLEAG  NLKLDTPLVW  RAYGGTFRVP300
300

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help