CAZyme3D

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Entry ID

Information for CAZyme ID: QEU80289.1

Basic Information

GenBank IDQEU80289.1
FamilyCBM50, GH23
Sequence Length357
UniProt IDA0A5P2UPH4(100,100)Download
Average pLDDT?63.73
CAZy50 ID127674
CAZy50 RepNo, AWZ15431.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID36818
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces subrutilus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRSGNGRHRR  PRQVPALVVT  AGVTGSALAL  PLLAATNATA  ADTSTWDRVA  ECESGGSWSA60
NFGSGAYGGL  QFTQEQWKNA  GGLDFAERPD  LASRSQQIAV  AERVLAAQGP  QAWPLCAATA120
GLAQQGAAAE  VDPGLPGSGG  AAAPTPNRPD  ADVPVTGTGA  PSTDFGAPTP  LPSPSDLPDG180
PLAPSLGLPV  MPAPDDPATS  PADPTAPADP  TAPTVPGEPA  TPAPDGSTPP  ADPTAPADPT240
APADPTAPAP  SPSGTPDPSG  GATPQTTTGA  STDPSALPSV  PEGSGKHRGT  PAAEESGAAD300
GASEPSYTVR  SGDSLTAIAS  ANGLKGGWNA  LYEANEQVIG  KDADLIKPGQ  NLDLSAE357

Predicted 3D structure by AlphaFold2 with pLDDT = 63.73 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(307-353)

MRSGNGRHRR  PRQVPALVVT  AGVTGSALAL  PLLAATNATA  ADTSTWDRVA  ECESGGSWSA60
NFGSGAYGGL  QFTQEQWKNA  GGLDFAERPD  LASRSQQIAV  AERVLAAQGP  QAWPLCAATA120
GLAQQGAAAE  VDPGLPGSGG  AAAPTPNRPD  ADVPVTGTGA  PSTDFGAPTP  LPSPSDLPDG180
PLAPSLGLPV  MPAPDDPATS  PADPTAPADP  TAPTVPGEPA  TPAPDGSTPP  ADPTAPADPT240
APADPTAPAP  SPSGTPDPSG  GATPQTTTGA  STDPSALPSV  PEGSGKHRGT  PAAEESGAAD300
GASEPSYTVR  SGDSLTAIAS  ANGLKGGWNA  LYEANEQVIG  KDADLIKPGQ  NLDLSAE357

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help