CAZyme3D

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Entry ID

Information for CAZyme ID: QEO27694.1

Basic Information

GenBank IDQEO27694.1
FamilyGT2
Sequence Length765
UniProt IDA0A5C1ZFQ3(100,100)Download
Average pLDDT?88.85
CAZy50 ID27663
CAZy50 RepNo, QRP63369.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID487909
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXanthomonas
SpeciesXanthomonas translucens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSETIALSVT  PLQQIAPLPP  TFPAAAAHDA  MWRASGSDPQ  VELHWQGEAL  AGGWYLLTGE60
LSVYRGRMFA  PVLYPTYRVR  HSGEAERIDL  PLNIPSGETR  RFEIVVRLVE  STTGIRFDPS120
VAPVDFSHSV  LHLQRIERGG  AMWRLFGASF  DRREGGVSKL  RLLARTTIDL  LTKGVRRMAD180
RLYHEYATRM  RSGFFSDYEV  WQEFYDCRDA  AWQEAADAEL  ASLTRRPLVS  VIVPTYNTPE240
RWLRRCIESV  REQVYPNWEL  CIADDASTDP  AVTRVLAEYA  ERDDRVRLQR  REQNGHISAA300
SNTALQMARG  EFVALLDHDD  ELHPLALLKS  VHAFEKNPQW  QMLFTDEDKI  DVEGKRSDPY360
FKSDWNPDLF  LSQNCVCHLT  VYRAEAVHAV  GGFLEGFEGA  QDWDLTLRIT  ERLPHDAVGH420
LPLVLYHWRM  ISGSTAMAPG  EKSYAHLAAL  RAVQAHLDRT  GNGAKVLEMP  SYSGYFRISY480
PLPAPAPLVS  LLIPTRDRID  LLKQCIDSIL  ERTDYPNYEI  VVIDNDSQEE  ASREYFAQVQ540
QDRRVRVLSY  PHPFNYSAIN  NAGARVARGT  VLGLLNNDIE  VISRDWLDEM  VGHALRPEIG600
VVGAMLYYPN  NTIQHAGVIL  GIGGVAGHCY  VGMARGWPGD  KHRGGLAQSL  SAVTAACAIV660
RRSVFEQVGG  LDEQLEVAFN  DVDFCLRVRE  AGYRNLWTPF  AELYHHESAS  RGYETTPEKI720
ARFKREESFM  KARWGKALQQ  DPYYNVNLTT  ESTPFTLAYP  PRVVN765

Predicted 3D structure by AlphaFold2 with pLDDT = 88.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(230-389)+GT2(490-668)

MSETIALSVT  PLQQIAPLPP  TFPAAAAHDA  MWRASGSDPQ  VELHWQGEAL  AGGWYLLTGE60
LSVYRGRMFA  PVLYPTYRVR  HSGEAERIDL  PLNIPSGETR  RFEIVVRLVE  STTGIRFDPS120
VAPVDFSHSV  LHLQRIERGG  AMWRLFGASF  DRREGGVSKL  RLLARTTIDL  LTKGVRRMAD180
RLYHEYATRM  RSGFFSDYEV  WQEFYDCRDA  AWQEAADAEL  ASLTRRPLVS  VIVPTYNTPE240
RWLRRCIESV  REQVYPNWEL  CIADDASTDP  AVTRVLAEYA  ERDDRVRLQR  REQNGHISAA300
SNTALQMARG  EFVALLDHDD  ELHPLALLKS  VHAFEKNPQW  QMLFTDEDKI  DVEGKRSDPY360
FKSDWNPDLF  LSQNCVCHLT  VYRAEAVHAV  GGFLEGFEGA  QDWDLTLRIT  ERLPHDAVGH420
LPLVLYHWRM  ISGSTAMAPG  EKSYAHLAAL  RAVQAHLDRT  GNGAKVLEMP  SYSGYFRISY480
PLPAPAPLVS  LLIPTRDRID  LLKQCIDSIL  ERTDYPNYEI  VVIDNDSQEE  ASREYFAQVQ540
QDRRVRVLSY  PHPFNYSAIN  NAGARVARGT  VLGLLNNDIE  VISRDWLDEM  VGHALRPEIG600
VVGAMLYYPN  NTIQHAGVIL  GIGGVAGHCY  VGMARGWPGD  KHRGGLAQSL  SAVTAACAIV660
RRSVFEQVGG  LDEQLEVAFN  DVDFCLRVRE  AGYRNLWTPF  AELYHHESAS  RGYETTPEKI720
ARFKREESFM  KARWGKALQQ  DPYYNVNLTT  ESTPFTLAYP  PRVVN765

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help