CAZyme3D

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Entry ID

Information for CAZyme ID: QEH36736.1

Basic Information

GenBank IDQEH36736.1
FamilyGH2
Sequence Length606
UniProt IDA0A5B9W7S4(100,100)Download
Average pLDDT?93.19
CAZy50 ID2581
CAZy50 RepNo, QGJ70829.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID406548
KingdomBacteria
PhylumPlanctomycetota
ClassPlanctomycetia
OrderIsosphaerales
FamilyIsosphaeraceae
GenusAquisphaera
SpeciesAquisphaera giovannonii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRRIIPIAIA  LLLAADAGPA  RAQWQPAKGR  LETRWTAGVR  PENAWKEYPR  PQLVREEWES60
LNGLWDYAIR  PRAESQPASW  DGKILVPFCA  ESALSGVMKE  VGPDRSLWYH  RTFSIPEGWA120
GRHVLLHFGA  VDWEATVTVN  GKAAGSHRGG  YDPFSINITP  FLKAGENTLV  VRVWDPTDAG180
FQPRGKQVRK  PEGIWYTAVT  GIWQTAWMEP  VAEDHIRGLR  IVPHLDRSAF  TVTVHGAEEG240
AVRIEARDGD  RLVGQAEGRT  GRGVAVPIVE  PKPWSPSSPH  LYDLTVTLLR  DGKVVDRVAS300
YAGLRKIEVR  RDSQDVLRLF  LNNEPLFQYG  PLDQGWWPDG  LYTAPTDEAL  KYDIEVTKQL360
GFNMARKHVK  VEPDRWYYWC  DKLGLLVWQD  MPSGDSGPEW  IRDVDRESPE  LRRSAESALN420
YDAELSELVV  DLGNHPSIVA  WVPFNEAWGQ  FDTPAAVERI  RRLDNTRPVN  AASGGNFQGV480
GDILDVHSYP  DPAMPRLDKF  MAVVCGEFGG  LGLPVENHTW  LEKGNWGYRS  YKTPQELTSA540
YVEKVNLLRP  LIAKGLAAAV  YTQTTDVEVE  VNGLMTYDRK  VIKMDRSAVA  EANQKLYPIA600
AEAARK606

Predicted 3D structure by AlphaFold2 with pLDDT = 93.19 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH2(49-486)

MRRIIPIAIA  LLLAADAGPA  RAQWQPAKGR  LETRWTAGVR  PENAWKEYPR  PQLVREEWES60
LNGLWDYAIR  PRAESQPASW  DGKILVPFCA  ESALSGVMKE  VGPDRSLWYH  RTFSIPEGWA120
GRHVLLHFGA  VDWEATVTVN  GKAAGSHRGG  YDPFSINITP  FLKAGENTLV  VRVWDPTDAG180
FQPRGKQVRK  PEGIWYTAVT  GIWQTAWMEP  VAEDHIRGLR  IVPHLDRSAF  TVTVHGAEEG240
AVRIEARDGD  RLVGQAEGRT  GRGVAVPIVE  PKPWSPSSPH  LYDLTVTLLR  DGKVVDRVAS300
YAGLRKIEVR  RDSQDVLRLF  LNNEPLFQYG  PLDQGWWPDG  LYTAPTDEAL  KYDIEVTKQL360
GFNMARKHVK  VEPDRWYYWC  DKLGLLVWQD  MPSGDSGPEW  IRDVDRESPE  LRRSAESALN420
YDAELSELVV  DLGNHPSIVA  WVPFNEAWGQ  FDTPAAVERI  RRLDNTRPVN  AASGGNFQGV480
GDILDVHSYP  DPAMPRLDKF  MAVVCGEFGG  LGLPVENHTW  LEKGNWGYRS  YKTPQELTSA540
YVEKVNLLRP  LIAKGLAAAV  YTQTTDVEVE  VNGLMTYDRK  VIKMDRSAVA  EANQKLYPIA600
AEAARK606

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help