CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: QEH00218.1

Basic Information

GenBank IDQEH00218.1
FamilyGH88
Sequence Length332
UniProt IDA0A5B9TER7(100,100)Download
Average pLDDT?97.62
CAZy50 ID10979
CAZy50 RepNo, AEV99313.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID77133
KingdomBacteria
Phylum
Class
Order
Family
Genus
Speciesuncultured bacterium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

PIDDWCSGFF  PGSMWLTYNL  TGDKKWLPLA  EKYTEALDSV  KYLKWHHDVG  FMIGCSYLNG60
YRFADKKEYK  DVIVEAAKSL  STRFRPGAGV  IQSWDADKGW  QGTRGWKCPV  IIDNMMNLEL120
LFEATAFSGD  STFYNIAVKH  ADTTMAHHFR  PDNSCYHVVD  YDPETGEVRK  RQTAQGYADE180
SSWARGQAWA  LYGYTACYRY  TKDKKYLDQA  QKVYNFIFTN  KNLPEDLVPY  WDYDAPNIPN240
EPRDASAAAC  TASALYELDG  YLPGNHYKET  ADKIMESLGS  PAYRAKVGTN  GNFILMHSVG300
SIPHGQEIDV  PLNYADYYFL  EGLMRKRDLE  KK332

Predicted 3D structure by AlphaFold2 with pLDDT = 97.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH88(2-325)

PIDDWCSGFF  PGSMWLTYNL  TGDKKWLPLA  EKYTEALDSV  KYLKWHHDVG  FMIGCSYLNG60
YRFADKKEYK  DVIVEAAKSL  STRFRPGAGV  IQSWDADKGW  QGTRGWKCPV  IIDNMMNLEL120
LFEATAFSGD  STFYNIAVKH  ADTTMAHHFR  PDNSCYHVVD  YDPETGEVRK  RQTAQGYADE180
SSWARGQAWA  LYGYTACYRY  TKDKKYLDQA  QKVYNFIFTN  KNLPEDLVPY  WDYDAPNIPN240
EPRDASAAAC  TASALYELDG  YLPGNHYKET  ADKIMESLGS  PAYRAKVGTN  GNFILMHSVG300
SIPHGQEIDV  PLNYADYYFL  EGLMRKRDLE  KK332

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help