CAZyme3D

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Entry ID

Information for CAZyme ID: QEE30011.1

Basic Information

GenBank IDQEE30011.1
FamilyGT2
Sequence Length256
UniProt IDA0A5B9EHT4(100,100)Download
Average pLDDT?92.51
CAZy50 ID131576
CAZy50 RepNo, QHS50368.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1592106
KingdomBacteria
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusTerriglobus
SpeciesTerriglobus albidus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTLSVAIITL  NEEENLRRTL  PSLQFADEVI  VVDSGSTDKT  VELARSFGAK  VYEEPWKGYA60
GQKNSAIAKC  TGDWILSLDA  DELVSPELAE  QLHILLPSNP  PHDAYYLPRR  NVIFGRWIRH120
GGFYPDSKLR  LFRRGAATFG  ARLVHETITF  EGESDELEGA  LVHYPYPTIA  DFVEHMNRYS180
GLGSEMLAQQ  GVVSRGYLTF  VWNVVIRPLL  QLKWNFWFRL  GFLDGREGLM  LHLYHAAYAS240
WKYAKAWEVG  KKKVAS256

Predicted 3D structure by AlphaFold2 with pLDDT = 92.51 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(4-98)

MTLSVAIITL  NEEENLRRTL  PSLQFADEVI  VVDSGSTDKT  VELARSFGAK  VYEEPWKGYA60
GQKNSAIAKC  TGDWILSLDA  DELVSPELAE  QLHILLPSNP  PHDAYYLPRR  NVIFGRWIRH120
GGFYPDSKLR  LFRRGAATFG  ARLVHETITF  EGESDELEGA  LVHYPYPTIA  DFVEHMNRYS180
GLGSEMLAQQ  GVVSRGYLTF  VWNVVIRPLL  QLKWNFWFRL  GFLDGREGLM  LHLYHAAYAS240
WKYAKAWEVG  KKKVAS256

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help