Information for CAZyme ID: QDZ16788.1
Basic Information
GenBank ID | QDZ16788.1 |
Family | GH3 |
Sequence Length | 512 |
UniProt ID | A0A5B8M7U7(100,100)![]() |
Average pLDDT? | 91.30 |
CAZy50 ID | 58674 |
CAZy50 Rep | No, UFS58989.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2599293 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Micrococcales |
Family | Microbacteriaceae |
Genus | Humibacter |
Species | Humibacter ginsenosidimutans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNDPDARNRA ISATLLPGFV GTSVPDALRT RFENGLGGVC IFGYNIESAQ QLEQLNDDIL | 60 |
SVAPLAVIAI DEEGGDVTRL NYADGSPYPG NAVLGRLDET ELTEKVGNSV GFALRRTSCT | 120 |
LDFAPDIDVN SNPDNPVIGV RSFGSDTALV ARHGAAATRG IQSAGIAACA KHFPGHGDTA | 180 |
LDSHLALPVI DRSLDELRER ELVPFRAAIE AGVLSIMTSH IVLPKVDPDA PATFSPRILQ | 240 |
GLLRDELGFD GVIVTDALDM KGASGETGIP EAAVRALRAG CDLLCIGSET TDELVGEVIA | 300 |
AIDAAITAGR LSAERVADAA GRVRALARRL ERLRSDIRAL PATQTGAPVG IERSQEAFDV | 360 |
RDGALDALRG DRPFAVVRIE TQANIAVGVA PWGPFAQTAA DPDAADSRAW AEHPEHIVAE | 420 |
VDAGQDAVLG GILAEVPEGF PVVVIGKAVH RYPFARRVVD TLRANRPTVV VDMGWPSDDR | 480 |
AYADVATFGA SRLLGRALMD LLDRTAASGD ER | 512 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.30 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(66-285)
MNDPDARNRA ISATLLPGFV GTSVPDALRT RFENGLGGVC IFGYNIESAQ QLEQLNDDIL | 60 |
SVAPLAVIAI DEEGGDVTRL NYADGSPYPG NAVLGRLDET ELTEKVGNSV GFALRRTSCT | 120 |
LDFAPDIDVN SNPDNPVIGV RSFGSDTALV ARHGAAATRG IQSAGIAACA KHFPGHGDTA | 180 |
LDSHLALPVI DRSLDELRER ELVPFRAAIE AGVLSIMTSH IVLPKVDPDA PATFSPRILQ | 240 |
GLLRDELGFD GVIVTDALDM KGASGETGIP EAAVRALRAG CDLLCIGSET TDELVGEVIA | 300 |
AIDAAITAGR LSAERVADAA GRVRALARRL ERLRSDIRAL PATQTGAPVG IERSQEAFDV | 360 |
RDGALDALRG DRPFAVVRIE TQANIAVGVA PWGPFAQTAA DPDAADSRAW AEHPEHIVAE | 420 |
VDAGQDAVLG GILAEVPEGF PVVVIGKAVH RYPFARRVVD TLRANRPTVV VDMGWPSDDR | 480 |
AYADVATFGA SRLLGRALMD LLDRTAASGD ER | 512 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.