CAZyme3D

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Entry ID

Information for CAZyme ID: QDV26494.1

Basic Information

GenBank IDQDV26494.1
FamilyGH163
Sequence Length768
UniProt IDA0A518GD20(100,100)Download
Average pLDDT?87.76
CAZy50 ID30548
CAZy50 RepNo, QDU96994.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2527968
KingdomBacteria
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPirellulales
FamilyPirellulaceae
GenusAureliella
SpeciesAureliella helgolandensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKLKLLIFGI  AAIWACPVGA  ASLVTARVAV  GEFVLPPNTA  AAEAYATKDV  RDWIQKITGA60
EVPIVTEPNA  STATKVFVGT  AFGKAFPTDL  ETLRGNDGFA  VRRKGNNVYV  FGSRPRGTLY120
GMYALLERNS  DLIFARPHED  FGTVHGQSPD  FELTDTDFID  IPVFLNRRFG  PNWPAHRATG180
EWLLRNRDNT  RDVRANYDGF  LNLDLIEPYG  TNFAVPIASH  QELHPEYFGY  DPIKKSRRFV240
KHGEGTMCLS  VPGLPAIWAE  GLAEDIAKHE  ARFGRKVDHV  RLGPGDNWFC  CQCDRCTAPL300
ALPDGTQLEC  QDPDSIKDPL  FRSTQIMMFI  NEAMETWQKV  RPEVPIHVLA  YIHFAEPPRV360
TPHPDLGIWF  APYPTSNLHY  PLLDARQPKP  WGRRFEKWLT  MTDRLGFYEY  FESKPSPQAF420
YAAANLRAVM  ERPDHSNSLI  YAEISNDFGT  DGIGNGQFGW  DVGQMNLWVH  TRLFWDPTQD480
VDSLYHYYIQ  RTYREAAPQM  LAYYDLIKTS  WLAPDNDTFS  SCHASIAGVY  QGLIVDRGLE540
KECMRLLSEA  EGAAQHPHSK  TMIRRMREQY  EGFGKDMARL  MIANIPEMRG  EADDFDSLQW600
EKPWVNDDFK  LVTRDSDEPK  AFSSTKLQAA  HDGDSLFLRF  RLEDLPPQVV  ARSGDKAESW660
PKGDHVEFWL  FGGGARYVFA  FNAGGSQYDA  KDLDRSWDSN  WELKVRQTSV  GWEAIASIPL720
STFQLGAGQP  TDLRWFCTRE  IQLSEQETTE  VSYQGKPLYY  RNFPIVVE768

Predicted 3D structure by AlphaFold2 with pLDDT = 87.76 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH163(215-503)+CBM9(600-729)

MKLKLLIFGI  AAIWACPVGA  ASLVTARVAV  GEFVLPPNTA  AAEAYATKDV  RDWIQKITGA60
EVPIVTEPNA  STATKVFVGT  AFGKAFPTDL  ETLRGNDGFA  VRRKGNNVYV  FGSRPRGTLY120
GMYALLERNS  DLIFARPHED  FGTVHGQSPD  FELTDTDFID  IPVFLNRRFG  PNWPAHRATG180
EWLLRNRDNT  RDVRANYDGF  LNLDLIEPYG  TNFAVPIASH  QELHPEYFGY  DPIKKSRRFV240
KHGEGTMCLS  VPGLPAIWAE  GLAEDIAKHE  ARFGRKVDHV  RLGPGDNWFC  CQCDRCTAPL300
ALPDGTQLEC  QDPDSIKDPL  FRSTQIMMFI  NEAMETWQKV  RPEVPIHVLA  YIHFAEPPRV360
TPHPDLGIWF  APYPTSNLHY  PLLDARQPKP  WGRRFEKWLT  MTDRLGFYEY  FESKPSPQAF420
YAAANLRAVM  ERPDHSNSLI  YAEISNDFGT  DGIGNGQFGW  DVGQMNLWVH  TRLFWDPTQD480
VDSLYHYYIQ  RTYREAAPQM  LAYYDLIKTS  WLAPDNDTFS  SCHASIAGVY  QGLIVDRGLE540
KECMRLLSEA  EGAAQHPHSK  TMIRRMREQY  EGFGKDMARL  MIANIPEMRG  EADDFDSLQW600
EKPWVNDDFK  LVTRDSDEPK  AFSSTKLQAA  HDGDSLFLRF  RLEDLPPQVV  ARSGDKAESW660
PKGDHVEFWL  FGGGARYVFA  FNAGGSQYDA  KDLDRSWDSN  WELKVRQTSV  GWEAIASIPL720
STFQLGAGQP  TDLRWFCTRE  IQLSEQETTE  VSYQGKPLYY  RNFPIVVE768

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help