CAZyme3D

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Entry ID

Information for CAZyme ID: QDU33994.1

Basic Information

GenBank IDQDU33994.1
FamilyGT35
Sequence Length714
UniProt IDA0A517YUT6(100,100)Download
Average pLDDT?95.12
CAZy50 ID36344
CAZy50 RepNo, QDU67878.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2528020
KingdomBacteria
PhylumPlanctomycetota
ClassPhycisphaerae
OrderPhycisphaerales
FamilyPhycisphaeraceae
GenusPoriferisphaera
SpeciesPoriferisphaera corsica

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTKAAQTKRQ  QQASIQQIAD  QLCDIASNFW  WTWNSSAQRL  FAAIDPMLWE  ATERNPLQTI60
KQAPDHRLLT  LASDEAFLKN  LKAVQKQFAD  YMKSKTWFDR  TVKGKDKKAR  IAYFCAEFAI120
HESFPIYSGG  LGVLAGDHLK  SASDLGIPLT  AVGLMYRHGY  YRQEIEADGS  TKAVYPEYDF180
NDFPIEDTGI  IVPVPVGRRR  IHAKVWLAKV  GRIEAYLLDT  DIEENTPKDR  EITHFLYGGD240
NETRIRQELI  LGVGGTLALQ  ALDIEPTVYH  LNEGHAAFNG  LHRFSELLKE  GVPSEEAMET300
VRAGGCFTTH  TPVPAGHDRF  DVKMARKYLS  QYAGEDTGLS  VNDVLQLGSE  DLDNKNAPFC360
MTVLALNFCE  RANGVAELHG  DTSRRMWIDH  FGLSDPDEVP  IGHVTNGIHS  QTWLAPEIEP420
LYTKYLKPNW  ASPNADSDWW  KKADKIPADV  LWNTRKMLRT  RLIRFVRERL  VQQAIKHGQP480
LEDIVTAQTM  LDENTLTIGF  ARRFATYKRA  PLIFHDMKRL  KAIIASTDRP  VQFVFAGKAH540
PADKDGQKYL  QQIVEFSKQP  GFRGRIAVIE  NYDMQVGRML  TSGVDVWLNN  PLRPMEASGT600
SGMKPPLHGG  INCSILDGWW  PESYNKKNGY  AIGGKQFDKQ  SEQDTYDANS  FYDILEKQML660
PTFYKTNKEG  VATKWVDMME  ASMKTVCAQF  STHRMLGDYT  SQYYLPAHRD  ALKK714

Predicted 3D structure by AlphaFold2 with pLDDT = 95.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(125-672)

MTKAAQTKRQ  QQASIQQIAD  QLCDIASNFW  WTWNSSAQRL  FAAIDPMLWE  ATERNPLQTI60
KQAPDHRLLT  LASDEAFLKN  LKAVQKQFAD  YMKSKTWFDR  TVKGKDKKAR  IAYFCAEFAI120
HESFPIYSGG  LGVLAGDHLK  SASDLGIPLT  AVGLMYRHGY  YRQEIEADGS  TKAVYPEYDF180
NDFPIEDTGI  IVPVPVGRRR  IHAKVWLAKV  GRIEAYLLDT  DIEENTPKDR  EITHFLYGGD240
NETRIRQELI  LGVGGTLALQ  ALDIEPTVYH  LNEGHAAFNG  LHRFSELLKE  GVPSEEAMET300
VRAGGCFTTH  TPVPAGHDRF  DVKMARKYLS  QYAGEDTGLS  VNDVLQLGSE  DLDNKNAPFC360
MTVLALNFCE  RANGVAELHG  DTSRRMWIDH  FGLSDPDEVP  IGHVTNGIHS  QTWLAPEIEP420
LYTKYLKPNW  ASPNADSDWW  KKADKIPADV  LWNTRKMLRT  RLIRFVRERL  VQQAIKHGQP480
LEDIVTAQTM  LDENTLTIGF  ARRFATYKRA  PLIFHDMKRL  KAIIASTDRP  VQFVFAGKAH540
PADKDGQKYL  QQIVEFSKQP  GFRGRIAVIE  NYDMQVGRML  TSGVDVWLNN  PLRPMEASGT600
SGMKPPLHGG  INCSILDGWW  PESYNKKNGY  AIGGKQFDKQ  SEQDTYDANS  FYDILEKQML660
PTFYKTNKEG  VATKWVDMME  ASMKTVCAQF  STHRMLGDYT  SQYYLPAHRD  ALKK714

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help