CAZyme3D

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Entry ID

Information for CAZyme ID: QDT09107.1

Basic Information

GenBank IDQDT09107.1
FamilyCBM47
Sequence Length1222
UniProt IDA0A517NPS0(100,100)Download
Average pLDDT?88.05
CAZy50 ID7191
CAZy50 RepNo, QEG40606.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1930275
KingdomBacteria
PhylumPlanctomycetota
Class
Order
Family
Genus
SpeciesPlanctomycetes bacterium K23_9

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIHKATTLCL  AIVISACWLV  VPSRSEEAGT  LVSKSVEKTL  PETVSFNAHI  RPLMSNTCFT60
CHGPDEEDNE  SEFRIDSFAS  ATSKLPSDDD  LVGIVPGDPM  ASEVYLRIIG  ESDGEQMPPE120
EFRHHLTDYD  KALFHRWIQQ  GAKYEQHWSY  APILQTGLPS  LSKHADKVAN  EIDAFVLAKL180
EANDIAPAPL  AEKSTLLRRL  SLDLTGLPPT  VQELKSFVAD  TSDNAYEKQV  ERLLESPHYG240
ERMASSWLDA  VRFADTVGFH  GDQNLRNAPY  RTYVIDSFNK  NKPFDVFTRE  QIAGDLLPDP300
TPEQLTATGA  LRLNMVTREG  GAQPGEYLAK  YKADRVRTLG  TAWLGSTLAC  CECHNHKYDP360
FSIKDFYSFG  AFFDDLRQWG  VYSSYGYTPN  PDLAGFNNNY  PFPPEMRVES  PASKAEIRYL420
QNERSAKLLA  ELGSQTIESD  EFRLWAKSLT  QTLQQYPNGW  IPANVTDVTT  AEKTNSKVLA480
DGSVLLTGKG  DSDETIRIVT  EYQAPTTINA  IRLEVLPDDK  NDGFIGRADD  GRFTLGLSAS540
IESVKQAKAK  KVANRPRYVR  VQLKGAKKIL  SLAELQVFVK  DDNGSLKNTA  LQGKASQSTN600
YKSAARAELA  IDGVTDGDYY  KSKSVTHTSL  DGSDPWWEVD  LGSQQKIEKI  VVWSRTDGNY660
LQRLKGFELV  LLDDNRKTLH  VAHPATPKPT  TTVSVPDQVS  PESTSPLNFA  WSEADRRDPP720
SYSNGRPPLT  LGDKWQSGPE  RWQLPSDENK  MLHTAVYHLD  QPVSIKADER  LVVLIQSGDV780
GRVRLSVTPV  GHAIAGWDAA  SAQLSESLRK  PSNELSQTDK  AALVGGFHLS  TTSFAKQSAT840
ATAYRDRILA  LHSGMEMTLV  SQPLPKDQIP  VSRILPRGNW  LDTNGDLAPP  SFPDFLPKPK900
HDTDERLSRL  DLANWIVSRE  NPLTSRHFVN  RLWKQFFGAG  LSGILDDLGN  QGEWPSHPLL960
LDWLASEFVD  SGWDVKHVVR  KIVMSRTYRQ  AAAVRDDLRD  LDPYNRMLAQ  QSARRLPAEL1020
VRDNALAISG  LLQADYIGGP  SFQPYQPAGH  YSNLQFPSRK  YKNTSDGRQY  RRGVYMHWQR1080
TFLHPMLVNF  DAPARDECSA  DRTQSNSPQQ  ALTLLNDPQF  VEAAVAMANR  LLRENADGEF1140
DDLLDQAFLI  ALSRSPSDVE  RDALSKLFQT  QTEYFKNNSE  DMNKTLAVDR  KSAYRPADPI1200
QHAALAQVCR  VILNLHETIT  RY1222

Predicted 3D structure by AlphaFold2 with pLDDT = 88.05 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM47(596-695)

MIHKATTLCL  AIVISACWLV  VPSRSEEAGT  LVSKSVEKTL  PETVSFNAHI  RPLMSNTCFT60
CHGPDEEDNE  SEFRIDSFAS  ATSKLPSDDD  LVGIVPGDPM  ASEVYLRIIG  ESDGEQMPPE120
EFRHHLTDYD  KALFHRWIQQ  GAKYEQHWSY  APILQTGLPS  LSKHADKVAN  EIDAFVLAKL180
EANDIAPAPL  AEKSTLLRRL  SLDLTGLPPT  VQELKSFVAD  TSDNAYEKQV  ERLLESPHYG240
ERMASSWLDA  VRFADTVGFH  GDQNLRNAPY  RTYVIDSFNK  NKPFDVFTRE  QIAGDLLPDP300
TPEQLTATGA  LRLNMVTREG  GAQPGEYLAK  YKADRVRTLG  TAWLGSTLAC  CECHNHKYDP360
FSIKDFYSFG  AFFDDLRQWG  VYSSYGYTPN  PDLAGFNNNY  PFPPEMRVES  PASKAEIRYL420
QNERSAKLLA  ELGSQTIESD  EFRLWAKSLT  QTLQQYPNGW  IPANVTDVTT  AEKTNSKVLA480
DGSVLLTGKG  DSDETIRIVT  EYQAPTTINA  IRLEVLPDDK  NDGFIGRADD  GRFTLGLSAS540
IESVKQAKAK  KVANRPRYVR  VQLKGAKKIL  SLAELQVFVK  DDNGSLKNTA  LQGKASQSTN600
YKSAARAELA  IDGVTDGDYY  KSKSVTHTSL  DGSDPWWEVD  LGSQQKIEKI  VVWSRTDGNY660
LQRLKGFELV  LLDDNRKTLH  VAHPATPKPT  TTVSVPDQVS  PESTSPLNFA  WSEADRRDPP720
SYSNGRPPLT  LGDKWQSGPE  RWQLPSDENK  MLHTAVYHLD  QPVSIKADER  LVVLIQSGDV780
GRVRLSVTPV  GHAIAGWDAA  SAQLSESLRK  PSNELSQTDK  AALVGGFHLS  TTSFAKQSAT840
ATAYRDRILA  LHSGMEMTLV  SQPLPKDQIP  VSRILPRGNW  LDTNGDLAPP  SFPDFLPKPK900
HDTDERLSRL  DLANWIVSRE  NPLTSRHFVN  RLWKQFFGAG  LSGILDDLGN  QGEWPSHPLL960
LDWLASEFVD  SGWDVKHVVR  KIVMSRTYRQ  AAAVRDDLRD  LDPYNRMLAQ  QSARRLPAEL1020
VRDNALAISG  LLQADYIGGP  SFQPYQPAGH  YSNLQFPSRK  YKNTSDGRQY  RRGVYMHWQR1080
TFLHPMLVNF  DAPARDECSA  DRTQSNSPQQ  ALTLLNDPQF  VEAAVAMANR  LLRENADGEF1140
DDLLDQAFLI  ALSRSPSDVE  RDALSKLFQT  QTEYFKNNSE  DMNKTLAVDR  KSAYRPADPI1200
QHAALAQVCR  VILNLHETIT  RY1222

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help