CAZyme3D

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Entry ID

Information for CAZyme ID: QDS77911.1

Basic Information

GenBank IDQDS77911.1
FamilyCBM87, CE18
Sequence Length676
UniProt IDA0A517LQJ3(100,100)Download
Average pLDDT?96.50
CAZy50 ID18596
CAZy50 RepNo, QQK47964.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID50376
KingdomEukaryota
PhylumAscomycota
ClassDothideomycetes
OrderVenturiales
FamilyVenturiaceae
GenusVenturia
SpeciesVenturia effusa

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MASVVSAANT  VKNTILVLAR  DTASGYSGTS  GLAGYGIPYQ  LVVVPQAGIT  LPVLNSTATA60
GNYGGIIVLS  DVAYSYAAGW  SSALTAAQWA  SLYAYQTSFG  VRMVRLDVYP  GPDFGTTTAI120
AGEGCCDAGV  EQLVSISNTA  AFPKAGLNTG  AGVSTQGLWH  YPATITNASI  ATEIAQFAPA180
GQFTSKTTAA  VINKIGSRQQ  MAFFMGFATE  WSATSSFLQH  AYIHWITRGL  FVGRRRLYFN240
TQIDDMHLET  DIYQPAGKLY  RVVPADMSTH  ITWAKALNTR  LPAGSSYKIE  IGHNGNGAVE300
NALAVNPSAC  TPTSAIEYPE  QIDTALEFQK  PLGTGTNIWP  ATPATYPVGW  GATCLKTDPL360
ASWFTTTANW  QGTFTHISHT  FTHAALNNAT  NSDAVKEITF  NKQWFTTMGM  TAAASFSSSG420
IIPPAITGLH  NGDVIKAWLD  NGITHVVGDN  TRPPLLNTVN  EFWPLTSTVA  ANGYAGLTIL480
PRWATTIFYN  CDTSDCTVAE  WVNTSGGKGD  FTALLADAKS  TNTRHLLGLH  QDGFMFHQAN540
MRADSTIPSY  TVGSQSVKSL  LQIWVETITQ  EMSRLTTWPL  ITLRQDEMAT  QFRNRQTRDG600
CSPNMVWNYS  ADNTKIVGAT  ITANSNTCSV  PIFATFPSAL  TVAPGTNDGV  GSDPLQYPVT660
LSGSAKTYLF  STAIAV676

Predicted 3D structure by AlphaFold2 with pLDDT = 96.50 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM87(18-236)+CE18(237-604)

MASVVSAANT  VKNTILVLAR  DTASGYSGTS  GLAGYGIPYQ  LVVVPQAGIT  LPVLNSTATA60
GNYGGIIVLS  DVAYSYAAGW  SSALTAAQWA  SLYAYQTSFG  VRMVRLDVYP  GPDFGTTTAI120
AGEGCCDAGV  EQLVSISNTA  AFPKAGLNTG  AGVSTQGLWH  YPATITNASI  ATEIAQFAPA180
GQFTSKTTAA  VINKIGSRQQ  MAFFMGFATE  WSATSSFLQH  AYIHWITRGL  FVGRRRLYFN240
TQIDDMHLET  DIYQPAGKLY  RVVPADMSTH  ITWAKALNTR  LPAGSSYKIE  IGHNGNGAVE300
NALAVNPSAC  TPTSAIEYPE  QIDTALEFQK  PLGTGTNIWP  ATPATYPVGW  GATCLKTDPL360
ASWFTTTANW  QGTFTHISHT  FTHAALNNAT  NSDAVKEITF  NKQWFTTMGM  TAAASFSSSG420
IIPPAITGLH  NGDVIKAWLD  NGITHVVGDN  TRPPLLNTVN  EFWPLTSTVA  ANGYAGLTIL480
PRWATTIFYN  CDTSDCTVAE  WVNTSGGKGD  FTALLADAKS  TNTRHLLGLH  QDGFMFHQAN540
MRADSTIPSY  TVGSQSVKSL  LQIWVETITQ  EMSRLTTWPL  ITLRQDEMAT  QFRNRQTRDG600
CSPNMVWNYS  ADNTKIVGAT  ITANSNTCSV  PIFATFPSAL  TVAPGTNDGV  GSDPLQYPVT660
LSGSAKTYLF  STAIAV676

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help