CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: QDI04554.1

Basic Information

GenBank IDQDI04554.1
FamilyCBM35, GH98
Sequence Length785
UniProt IDA0A514EEV4(100,100)Download
Average pLDDT?89.62
CAZy50 ID11690
CAZy50 RepNo, QEI20698.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID152263
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXanthomonas
SpeciesXanthomonas translucens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKMHTGLSKS  ALPCALLSVL  LSSCGGDDPD  GSGAAAAADL  TMATPSAWSV  TTRTPAAAPR60
AATTAAAAGE  TPDASLRRPL  SPHQPMFLIH  ADTWNAADPQ  KIIDLIPADL  RPYTVLLISL120
SINHQGATGN  QCNWIQVENG  LETARSWIKT  AAANGVWAMI  QPSSGGFSHL  PDYAPNADLE180
ATAYGEFFRD  YPNFIGFNYA  EQFWGFDQPC  SGSPAQRWEH  WANLLKLTNK  YGGYLAVSFT240
GGFYSANINP  LAMVKRNPIF  RNALGAYAKN  FIIEEKFTTD  YGYHDIESVS  LGMFLSGYAG300
HYGIRTDRSG  WYSSDGSSYP  VQAGSPHLIE  HLTFTGETVF  DGPEQITLDA  VHTLPNATTA360
DGYNSRRWEF  YPHFRNIQLD  IYRKILDGTL  RILSRQEVID  RSKVVIVNDT  NTGDDRNLYS420
SPETLFSGLY  LLDGDGTYMN  QHSWYKKTGR  YPAIPTVWQL  TDATAESFKV  QIAKTAYAAR480
WPTMTAKLGE  LNALFPQEYT  GTIYAGRQDN  TWVTYNPSKA  NQTASGTIPL  KYNSCAAVSV540
NYAPYSSGVI  KEFPDRLSIY  LSNFDSPNGA  LKTDTIDIDG  ATATPTYTFV  DRGDHQPSKI600
TSAATADGLT  LSVAHNGPLD  ITVHCTGNAS  GRASSAPVAS  LQAPDAPPAY  TGVQQYEAEN660
FDFRNIRSMV  ANGVSGPLRN  YQGMGYVDFG  TGGGASIRDD  VRVASAGTYR  LQTRYSTAGA720
SIANVDLYVN  GIKVGTPVFA  QTASASDWAT  LQQAVTLNAG  SNRIEFRASA  ARPASLYLDN780
IRLSH785

Predicted 3D structure by AlphaFold2 with pLDDT = 89.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH98(74-390)+CBM35(675-782)

MKMHTGLSKS  ALPCALLSVL  LSSCGGDDPD  GSGAAAAADL  TMATPSAWSV  TTRTPAAAPR60
AATTAAAAGE  TPDASLRRPL  SPHQPMFLIH  ADTWNAADPQ  KIIDLIPADL  RPYTVLLISL120
SINHQGATGN  QCNWIQVENG  LETARSWIKT  AAANGVWAMI  QPSSGGFSHL  PDYAPNADLE180
ATAYGEFFRD  YPNFIGFNYA  EQFWGFDQPC  SGSPAQRWEH  WANLLKLTNK  YGGYLAVSFT240
GGFYSANINP  LAMVKRNPIF  RNALGAYAKN  FIIEEKFTTD  YGYHDIESVS  LGMFLSGYAG300
HYGIRTDRSG  WYSSDGSSYP  VQAGSPHLIE  HLTFTGETVF  DGPEQITLDA  VHTLPNATTA360
DGYNSRRWEF  YPHFRNIQLD  IYRKILDGTL  RILSRQEVID  RSKVVIVNDT  NTGDDRNLYS420
SPETLFSGLY  LLDGDGTYMN  QHSWYKKTGR  YPAIPTVWQL  TDATAESFKV  QIAKTAYAAR480
WPTMTAKLGE  LNALFPQEYT  GTIYAGRQDN  TWVTYNPSKA  NQTASGTIPL  KYNSCAAVSV540
NYAPYSSGVI  KEFPDRLSIY  LSNFDSPNGA  LKTDTIDIDG  ATATPTYTFV  DRGDHQPSKI600
TSAATADGLT  LSVAHNGPLD  ITVHCTGNAS  GRASSAPVAS  LQAPDAPPAY  TGVQQYEAEN660
FDFRNIRSMV  ANGVSGPLRN  YQGMGYVDFG  TGGGASIRDD  VRVASAGTYR  LQTRYSTAGA720
SIANVDLYVN  GIKVGTPVFA  QTASASDWAT  LQQAVTLNAG  SNRIEFRASA  ARPASLYLDN780
IRLSH785

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help