Information for CAZyme ID: QDG69606.1
Basic Information
| GenBank ID | QDG69606.1 |
| Family | GT20 |
| Sequence Length | 755 |
| UniProt ID | A0A4Y6RAJ3(100,100) |
| Average pLDDT? | 85.32 |
| CAZy50 ID | 27405 |
| CAZy50 Rep | No, AWI52656.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2590869 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium tructae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSLRFILPLA LVLGLFAYIV VPLLDNITLR WYVRDLDSRA ELLAGTLRPS LTEYLPAQDA | 60 |
| TRIGELFQGA TRDERLIAIG FCDNAGHLLY QSAQYPASIG CWSTPPTGGL YKSLAQLPQG | 120 |
| QVHLSETPVM QDASQLGRLV LVQDMSFVER RNTDTKRFIF AFLAVLAVLI SLMTVFVAHL | 180 |
| SWRGWLSAVK DILRGELLPK SNGAVATATA PAAAPAPPPE MQPLIGDLRE LLQEYHLERQ | 240 |
| SDSGWSSDWT PDKLRALLEA DLQGDQVLVV SNREPYIHTK TETGITVQRP ASGLVTAVEA | 300 |
| VMRACSGTWI AHGAGSADRE TVDKLDHVPV PPDNPSYTLR RVWLTQEEEQ GYYYGFANEG | 360 |
| MWPLCHIAHV RPVFRSSDWE QYVKVNRRFA DAVIAEAKTD NPVVLVQDYH FALLPRMVRE | 420 |
| ALPKATIITF WHIPWPNSES FGICPWREEI LDGLLGSTIL GFHTPFHRKN FLETVDRYLE | 480 |
| TRIEPEASTI SYGGEMTQVE DYPISIAWPE DNPEQPDVAT CRAQIRAELG VSADHLLGIG | 540 |
| VDRLDYTKGI VERFQAVERM LEQQPGMVGN FTFVQIAAPS RASLDEYQSF DARVRKMVER | 600 |
| INRRFGSGNY VPILLKAEHH GQDDLQRYFR ASEVCMVTSL HDGMNLVAKE FIAARDDELG | 660 |
| VLVLSQFTGA ARELHEALII NPYHIEQGAD ALYRGLVMPP VEQRERMKSM RARVKHFNVY | 720 |
| RWAGRMLLDA ARLRQRDKVM TKIDAHSRIK RRKGL | 755 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.32 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT20(265-729)
| MSLRFILPLA LVLGLFAYIV VPLLDNITLR WYVRDLDSRA ELLAGTLRPS LTEYLPAQDA | 60 |
| TRIGELFQGA TRDERLIAIG FCDNAGHLLY QSAQYPASIG CWSTPPTGGL YKSLAQLPQG | 120 |
| QVHLSETPVM QDASQLGRLV LVQDMSFVER RNTDTKRFIF AFLAVLAVLI SLMTVFVAHL | 180 |
| SWRGWLSAVK DILRGELLPK SNGAVATATA PAAAPAPPPE MQPLIGDLRE LLQEYHLERQ | 240 |
| SDSGWSSDWT PDKLRALLEA DLQGDQVLVV SNREPYIHTK TETGITVQRP ASGLVTAVEA | 300 |
| VMRACSGTWI AHGAGSADRE TVDKLDHVPV PPDNPSYTLR RVWLTQEEEQ GYYYGFANEG | 360 |
| MWPLCHIAHV RPVFRSSDWE QYVKVNRRFA DAVIAEAKTD NPVVLVQDYH FALLPRMVRE | 420 |
| ALPKATIITF WHIPWPNSES FGICPWREEI LDGLLGSTIL GFHTPFHRKN FLETVDRYLE | 480 |
| TRIEPEASTI SYGGEMTQVE DYPISIAWPE DNPEQPDVAT CRAQIRAELG VSADHLLGIG | 540 |
| VDRLDYTKGI VERFQAVERM LEQQPGMVGN FTFVQIAAPS RASLDEYQSF DARVRKMVER | 600 |
| INRRFGSGNY VPILLKAEHH GQDDLQRYFR ASEVCMVTSL HDGMNLVAKE FIAARDDELG | 660 |
| VLVLSQFTGA ARELHEALII NPYHIEQGAD ALYRGLVMPP VEQRERMKSM RARVKHFNVY | 720 |
| RWAGRMLLDA ARLRQRDKVM TKIDAHSRIK RRKGL | 755 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.