CAZyme3D

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Entry ID

Information for CAZyme ID: QCU55111.1

Basic Information

GenBank IDQCU55111.1
FamilyCBM45, GH13_6
Sequence Length914
UniProt IDA0A4P9I8W8(100,100)Download
Average pLDDT?74.72
CAZy50 ID16693
CAZy50 RepNo, CAG1830528.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID542725
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderEricales
FamilyTheaceae
GenusCamellia
SpeciesCamellia fraterna

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSTFALEHLG  YHCRRELPNF  RPIYKKSNAF  SLTYTPRPRR  RRRPLSHGSI  FCNFRPPLSV60
PLRATSTNTA  LVEDTFESEE  VLFKETFPLK  RTQKAEGKIS  IRLDNGKDQE  NWQLTVGCNL120
PGKWVLHWGV  NYVTDIGRFA  LNFFLKWKVC  SKSEWDQPPV  EMSPPDSIPI  KDYAIETPLK180
KSSAVVEGDL  YYELKINFST  NRDIAAINFV  LKDEETGAWY  QHKGRDFKVV  LIDNLHEDGN240
FVGAKKGLGI  WRGALGQLSG  VLLKSEGAHP  KGEDSSGSRY  PHQKNKSLEG  FYEEHSIVRE300
VLISNSVTVS  VRKCPEMAKN  LLYMETDLPG  DVVVHWGVCK  DDGKKWEIPA  EPYPAETIVF360
KNKALRTLLK  QKGGHGGSSL  FTLDEGYLGF  LFVLKLNDNT  WLNCMGNDFY  IPLSSSSGLS420
AISRHGQSEA  QVDTNQVASP  ATYTDEIIDD  IRNLVTDISS  EKGQIRKMKE  AQESILQEIE480
KLAAEAYSMF  RSSIPTFSEK  VLVEPEEIVP  AAKICTGTGS  GFEILCQGFN  WESHKSGRWY540
MELCEKVAEL  SSLGFTVVWL  PPPTDSVSPE  GYMPKDLYNL  NSRYGSTDEL  KGLVKRFHEV600
NIRVLGDAVL  NHRCAEYQNQ  NGVWNIFGGR  LNWDDRAVVA  DDPHFQGKGN  KSSGDCFHAA660
PNIDHSHEFV  RKDLKEWLCW  LREEIGYDGW  RLDFVRGFWG  GYVKDYIEAS  EPYFSVGEYW720
DSLNYTYGDM  DHNQDAHRQR  IVDWINDTNG  TAGAFDVTTK  GILHAALERC  EYWRLSDQKG780
RPPGVVGWWP  SRAVTFIENH  DTGSTQGHWR  FPGGKEMQGY  AYILTHPGTP  AVFYDHIFSH840
MKSEISELIS  LRNRNKIHCR  SMIKITKAER  DVYAAVIEEK  VAMKIGPGHY  EPPSGPERWS900
LAIEGRDYKV  WEAS914

Predicted 3D structure by AlphaFold2 with pLDDT = 74.72 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM45(146-227)+CBM45(334-409)+GH13_6(548-833)

MSTFALEHLG  YHCRRELPNF  RPIYKKSNAF  SLTYTPRPRR  RRRPLSHGSI  FCNFRPPLSV60
PLRATSTNTA  LVEDTFESEE  VLFKETFPLK  RTQKAEGKIS  IRLDNGKDQE  NWQLTVGCNL120
PGKWVLHWGV  NYVTDIGRFA  LNFFLKWKVC  SKSEWDQPPV  EMSPPDSIPI  KDYAIETPLK180
KSSAVVEGDL  YYELKINFST  NRDIAAINFV  LKDEETGAWY  QHKGRDFKVV  LIDNLHEDGN240
FVGAKKGLGI  WRGALGQLSG  VLLKSEGAHP  KGEDSSGSRY  PHQKNKSLEG  FYEEHSIVRE300
VLISNSVTVS  VRKCPEMAKN  LLYMETDLPG  DVVVHWGVCK  DDGKKWEIPA  EPYPAETIVF360
KNKALRTLLK  QKGGHGGSSL  FTLDEGYLGF  LFVLKLNDNT  WLNCMGNDFY  IPLSSSSGLS420
AISRHGQSEA  QVDTNQVASP  ATYTDEIIDD  IRNLVTDISS  EKGQIRKMKE  AQESILQEIE480
KLAAEAYSMF  RSSIPTFSEK  VLVEPEEIVP  AAKICTGTGS  GFEILCQGFN  WESHKSGRWY540
MELCEKVAEL  SSLGFTVVWL  PPPTDSVSPE  GYMPKDLYNL  NSRYGSTDEL  KGLVKRFHEV600
NIRVLGDAVL  NHRCAEYQNQ  NGVWNIFGGR  LNWDDRAVVA  DDPHFQGKGN  KSSGDCFHAA660
PNIDHSHEFV  RKDLKEWLCW  LREEIGYDGW  RLDFVRGFWG  GYVKDYIEAS  EPYFSVGEYW720
DSLNYTYGDM  DHNQDAHRQR  IVDWINDTNG  TAGAFDVTTK  GILHAALERC  EYWRLSDQKG780
RPPGVVGWWP  SRAVTFIENH  DTGSTQGHWR  FPGGKEMQGY  AYILTHPGTP  AVFYDHIFSH840
MKSEISELIS  LRNRNKIHCR  SMIKITKAER  DVYAAVIEEK  VAMKIGPGHY  EPPSGPERWS900
LAIEGRDYKV  WEAS914

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help