CAZyme3D

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Entry ID

Information for CAZyme ID: QCO22166.1

Basic Information

GenBank IDQCO22166.1
FamilyCE4
Sequence Length321
UniProt IDA0A4P8DV67(100,100)Download
Average pLDDT?97.22
CAZy50 ID73251
CAZy50 RepNo, ASJ74186.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2136182
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter cumulans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSVPYLRGQA  LIDEIQQQDY  SRDLIGYHGK  PPLAQWPDQA  RIAVQFVLNY  EEGGENHVEH60
GDAGSEQFLS  EIVGAASFPA  KHMSMDSMYE  YGSRVGFWRI  HEEFQKRQLP  MTIFGVGMAL120
ARNPHVVQAI  KEANYDVVSH  GQRWLHYQNL  PIEIERQHMD  QAISVLEALF  GQAPIGWYTG180
RDSPNTRQLL  AEFPQIQYDC  DHYGDDLPFW  STLTDSAGQS  HPHLIIPYTL  ECNDMKFSSA240
GGFNTGEHFY  QYLKDSFDVL  YAEGETAPKM  MSIGMHCRLL  GRPGRFKALQ  RFLDYVQSHE300
KVWICKRGDI  ALHWQKTHRQ  N321

Predicted 3D structure by AlphaFold2 with pLDDT = 97.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(98-176)

MSVPYLRGQA  LIDEIQQQDY  SRDLIGYHGK  PPLAQWPDQA  RIAVQFVLNY  EEGGENHVEH60
GDAGSEQFLS  EIVGAASFPA  KHMSMDSMYE  YGSRVGFWRI  HEEFQKRQLP  MTIFGVGMAL120
ARNPHVVQAI  KEANYDVVSH  GQRWLHYQNL  PIEIERQHMD  QAISVLEALF  GQAPIGWYTG180
RDSPNTRQLL  AEFPQIQYDC  DHYGDDLPFW  STLTDSAGQS  HPHLIIPYTL  ECNDMKFSSA240
GGFNTGEHFY  QYLKDSFDVL  YAEGETAPKM  MSIGMHCRLL  GRPGRFKALQ  RFLDYVQSHE300
KVWICKRGDI  ALHWQKTHRQ  N321

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help