CAZyme3D

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Entry ID

Information for CAZyme ID: QCE02760.1

Basic Information

GenBank IDQCE02760.1
FamilyGT90
Sequence Length475
UniProt IDA0A4D6MMG8(100,100)Download
Average pLDDT?89.76
CAZy50 ID37305
CAZy50 RepNo, CAE6117295.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3917
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderFabales
FamilyFabaceae
GenusVigna
SpeciesVigna unguiculata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIKWIFFIII  LIVFVASSFF  LEADFSRITS  TTLLNTIIIF  NKPQLQFPLN  CTDKNKAATC60
SSYYPTTSEF  DGDSTTSCPD  YFRWIHEDLK  PWKSTGITKD  MVERGRNVSH  FRLVIVNGKV120
YVQNLDKVYQ  TRDVFTIWGI  LQLIRLYPGK  IPDLDLMFQC  GDKTVILKKD  FQGPKALSPP180
PVFHYCGDEN  SHDIVFPDWS  FWGWPEINIG  PWERTLHNIL  EGNKKSKWID  RVPYAFWKGN240
PAVANIRREL  MKCNPTQQQD  WNARLESIEW  NREKASNYEN  AKLENQCTHR  YKIYIEGAAW300
SVSEKYIILC  DSMTLLIEPI  YYDFFTRNMV  PLRHYWPISP  RNMCEDIKYA  VDWGNSHLQH360
AQVIGNGGTE  YILENLKLKY  VYDYMFHLLN  DYAKLLKFKP  TVPEGAVEIC  SESMACPVQG420
LQKSFMEESM  VNSPSDTPPC  AMPSPYTPQN  LKQFLQEKEN  LIQQVKKKGV  NSLLA475

Predicted 3D structure by AlphaFold2 with pLDDT = 89.76 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT90(150-398)

MIKWIFFIII  LIVFVASSFF  LEADFSRITS  TTLLNTIIIF  NKPQLQFPLN  CTDKNKAATC60
SSYYPTTSEF  DGDSTTSCPD  YFRWIHEDLK  PWKSTGITKD  MVERGRNVSH  FRLVIVNGKV120
YVQNLDKVYQ  TRDVFTIWGI  LQLIRLYPGK  IPDLDLMFQC  GDKTVILKKD  FQGPKALSPP180
PVFHYCGDEN  SHDIVFPDWS  FWGWPEINIG  PWERTLHNIL  EGNKKSKWID  RVPYAFWKGN240
PAVANIRREL  MKCNPTQQQD  WNARLESIEW  NREKASNYEN  AKLENQCTHR  YKIYIEGAAW300
SVSEKYIILC  DSMTLLIEPI  YYDFFTRNMV  PLRHYWPISP  RNMCEDIKYA  VDWGNSHLQH360
AQVIGNGGTE  YILENLKLKY  VYDYMFHLLN  DYAKLLKFKP  TVPEGAVEIC  SESMACPVQG420
LQKSFMEESM  VNSPSDTPPC  AMPSPYTPQN  LKQFLQEKEN  LIQQVKKKGV  NSLLA475

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help