CAZyme3D

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Entry ID

Information for CAZyme ID: QCE02224.1

Basic Information

GenBank IDQCE02224.1
FamilyGT37
Sequence Length604
UniProt IDA0A4D6MN89(100,100)Download
Average pLDDT?74.82
CAZy50 ID43631
CAZy50 RepNo, ACF22876.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3917
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderFabales
FamilyFabaceae
GenusVigna
SpeciesVigna unguiculata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MEIFQAKVDN  TRISSNRYTT  FFVVLFISFP  VAVIVSSMYR  NSSFFVFEGF  FQAREAGKSF60
QNITTTGSQL  GERVHNISDD  NLRPVGELLT  SEPNVTTNGT  VQNVTHHILE  GNNNNSVSGL120
KNASLTGSTN  ESFPRVSLDN  KEELLGGLLT  GGFDEASCIS  RVQSHLFRKV  SPHKASPFLI180
SKLRNYEEIH  RRCGPNTRAY  DGSMRKIARS  KDNGTATMCK  YLIWTPVNGL  GNQMISIVAT240
FLYAILTDRV  LLVKFGEDKH  DLFCEPFLNS  TWILPQKSPF  WKENHIQTQL  QKDKVNNSTS300
VLFINLQYTH  SSHEKIFHCD  QTQDLIRNIP  LLILMSDQYF  VPSLFMNQLF  NMEISKMFPE360
KDTIFHHLGR  YLFHPSNEAW  ELISRYYQAH  LAKADERIGI  QIRVFNAIST  PKQAIMDLVL420
SCTLNHKILP  KVDLQTSMSS  VGKNETVKAV  LVASLYKEFG  DNLRRMYEKK  ATASGEFIEV480
YQPSHEGKQM  FNDKKHNVKA  WMEMYLLSLC  DVLVTTSLST  FGYVAQGLGN  LKPWFLYRLV540
KNETHFPPCE  QDFSLEPCYH  DPPKHYCDGK  PLKDFVSSFS  SLKKCKDFSF  GVKLVNDTTT600
FFHK604

Predicted 3D structure by AlphaFold2 with pLDDT = 74.82 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT37(136-568)

MEIFQAKVDN  TRISSNRYTT  FFVVLFISFP  VAVIVSSMYR  NSSFFVFEGF  FQAREAGKSF60
QNITTTGSQL  GERVHNISDD  NLRPVGELLT  SEPNVTTNGT  VQNVTHHILE  GNNNNSVSGL120
KNASLTGSTN  ESFPRVSLDN  KEELLGGLLT  GGFDEASCIS  RVQSHLFRKV  SPHKASPFLI180
SKLRNYEEIH  RRCGPNTRAY  DGSMRKIARS  KDNGTATMCK  YLIWTPVNGL  GNQMISIVAT240
FLYAILTDRV  LLVKFGEDKH  DLFCEPFLNS  TWILPQKSPF  WKENHIQTQL  QKDKVNNSTS300
VLFINLQYTH  SSHEKIFHCD  QTQDLIRNIP  LLILMSDQYF  VPSLFMNQLF  NMEISKMFPE360
KDTIFHHLGR  YLFHPSNEAW  ELISRYYQAH  LAKADERIGI  QIRVFNAIST  PKQAIMDLVL420
SCTLNHKILP  KVDLQTSMSS  VGKNETVKAV  LVASLYKEFG  DNLRRMYEKK  ATASGEFIEV480
YQPSHEGKQM  FNDKKHNVKA  WMEMYLLSLC  DVLVTTSLST  FGYVAQGLGN  LKPWFLYRLV540
KNETHFPPCE  QDFSLEPCYH  DPPKHYCDGK  PLKDFVSSFS  SLKKCKDFSF  GVKLVNDTTT600
FFHK604

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help