CAZyme3D

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Entry ID

Information for CAZyme ID: QCD93041.1

Basic Information

GenBank IDQCD93041.1
FamilyGH81
Sequence Length692
UniProt IDA0A4D6LXC4(100,100)Download
Average pLDDT?91.64
CAZy50 ID9330
CAZy50 RepNo, QHO10036.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3917
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderFabales
FamilyFabaceae
GenusVigna
SpeciesVigna unguiculata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLSKTHIYIT  PFKPSPSPQH  NQTPVPPSSE  PAMAKQNKTH  FIFPEAQSTV  LPDPSEFFSS60
TLLSKPLPTN  SFFQNFVLKN  GDQPEYIHPY  LIKSSNSSLS  LSYPSRQVSS  AVIYQVFNAD120
LTISSKQGSS  GKHVISSYSD  LSVTLDIPSS  NLSFLLVRGS  PFLTVSVTQP  TPLSITTIHS180
ILSFSSNNTH  TKHTFQFNNG  QTWILYASSP  ITLSHTLSEI  TSHAFSGIVR  IALLPDSDSK240
HEAVLDKFSS  CYPVSGEAKF  REPFCVEYKW  EKKGSGDLLL  LAHPLHLQLL  SNADNDVTVL300
EDFKYGSIDG  DVVGVVGNSW  VLKTDPVFVT  WQSTNGVKEE  SHDEIVSALS  NDVDGLNSSS360
ITETRSYFYG  KLVARAARLA  LIAEELCYPD  VIPMVIRFLK  ETIEPWLEGT  LKGNGFLHDK420
KWGGIITQQG  SNDGGGDFGF  GIYNDHHYHL  GYFLYGIAVV  TKFDEGWGRK  YKAEAYSLVQ480
DFMNLDTKSN  SNYTRLRCFD  PYVLHSWAGG  LTEFTDGRNQ  ESTSEAVCAY  YSAALMGLAY540
GDAHLVSLGS  TLTALEILGT  KMWWHVEEKG  TLYEEEFTEE  NRIMGVLWSN  KRDTGLWFAP600
AEWKECRLGI  QLLPLVPISE  AIFSNAEFVK  QLVEWTLPAL  NRDGVGEGWK  GFVYALEGIY660
DHESALHKIR  NLTGFDGGNS  LTNLLWWIHS  RG692

Predicted 3D structure by AlphaFold2 with pLDDT = 91.64 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH81(49-687)

MLSKTHIYIT  PFKPSPSPQH  NQTPVPPSSE  PAMAKQNKTH  FIFPEAQSTV  LPDPSEFFSS60
TLLSKPLPTN  SFFQNFVLKN  GDQPEYIHPY  LIKSSNSSLS  LSYPSRQVSS  AVIYQVFNAD120
LTISSKQGSS  GKHVISSYSD  LSVTLDIPSS  NLSFLLVRGS  PFLTVSVTQP  TPLSITTIHS180
ILSFSSNNTH  TKHTFQFNNG  QTWILYASSP  ITLSHTLSEI  TSHAFSGIVR  IALLPDSDSK240
HEAVLDKFSS  CYPVSGEAKF  REPFCVEYKW  EKKGSGDLLL  LAHPLHLQLL  SNADNDVTVL300
EDFKYGSIDG  DVVGVVGNSW  VLKTDPVFVT  WQSTNGVKEE  SHDEIVSALS  NDVDGLNSSS360
ITETRSYFYG  KLVARAARLA  LIAEELCYPD  VIPMVIRFLK  ETIEPWLEGT  LKGNGFLHDK420
KWGGIITQQG  SNDGGGDFGF  GIYNDHHYHL  GYFLYGIAVV  TKFDEGWGRK  YKAEAYSLVQ480
DFMNLDTKSN  SNYTRLRCFD  PYVLHSWAGG  LTEFTDGRNQ  ESTSEAVCAY  YSAALMGLAY540
GDAHLVSLGS  TLTALEILGT  KMWWHVEEKG  TLYEEEFTEE  NRIMGVLWSN  KRDTGLWFAP600
AEWKECRLGI  QLLPLVPISE  AIFSNAEFVK  QLVEWTLPAL  NRDGVGEGWK  GFVYALEGIY660
DHESALHKIR  NLTGFDGGNS  LTNLLWWIHS  RG692

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help