CAZyme3D

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Entry ID

Information for CAZyme ID: QBZ97298.1

Basic Information

GenBank IDQBZ97298.1
FamilyGT51
Sequence Length649
UniProt IDA0A4P7PR22(100,100)Download
Average pLDDT?85.70
CAZy50 ID43228
CAZy50 RepNo, ALM49055.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2518177
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sangjuense

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKTRQKAIL  SLKIISVLLL  LGLVLLFAFR  NTILDKVIHR  IDAKLERDYQ  CNFTIQKAEF60
HDLTNLEFHD  ISLVPHQKDT  LVSIGELKTS  VSFWKLLVGD  IQLGKLEINK  GFIQLVKTKN120
GSNFDAFLHS  KKEKDEKAEV  NYAKLLNRIS  SKLMDLVPTD  MQVKGFAFRI  DDKGNKVVFD180
FNELALANKK  LTTIIQVTSD  KFSQQWSING  FADPRDRKAD  LTFANAKNDT  IIIPYIDKKF240
NLKSGFKSIH  FNLENLAMNS  GELHIEGYSS  IQDLVVNNPK  IANKDVIIKS  ARFDYHWIVG300
ERFMALDSTS  TVQLNNIKCQ  PYISYTNEKD  KVYALKLKIP  KMKAQDFISS  LPKGLFRHFE360
GMEAQGNFSY  ALNFEYNNHK  PKDVIFTSKL  KPDGIKITKY  GEADLNKING  NFVYRAVDKG420
VLQRPINVGP  GNGNYTPLSL  MSPYLKKCVL  TSEDPSFMTH  RGFINEAFRE  SITKNIRTKK480
FSRGASTISM  QLVKNVFLTR  EKTLSRKLEE  ILLVYILENN  RISSKDRMLE  VYFNIIEWGP540
NVYGIAEASE  FYFQKRPWDL  NVNQCLFLAT  IIPNPKGFMA  KFDANNKLKP  AAKQTEKFLT600
NLMFKRNILM  ANDTIGNFPL  EISGRAKFFL  KQKPTSIDSD  KTPVEEFEF649

Predicted 3D structure by AlphaFold2 with pLDDT = 85.70 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(432-583)

MKKTRQKAIL  SLKIISVLLL  LGLVLLFAFR  NTILDKVIHR  IDAKLERDYQ  CNFTIQKAEF60
HDLTNLEFHD  ISLVPHQKDT  LVSIGELKTS  VSFWKLLVGD  IQLGKLEINK  GFIQLVKTKN120
GSNFDAFLHS  KKEKDEKAEV  NYAKLLNRIS  SKLMDLVPTD  MQVKGFAFRI  DDKGNKVVFD180
FNELALANKK  LTTIIQVTSD  KFSQQWSING  FADPRDRKAD  LTFANAKNDT  IIIPYIDKKF240
NLKSGFKSIH  FNLENLAMNS  GELHIEGYSS  IQDLVVNNPK  IANKDVIIKS  ARFDYHWIVG300
ERFMALDSTS  TVQLNNIKCQ  PYISYTNEKD  KVYALKLKIP  KMKAQDFISS  LPKGLFRHFE360
GMEAQGNFSY  ALNFEYNNHK  PKDVIFTSKL  KPDGIKITKY  GEADLNKING  NFVYRAVDKG420
VLQRPINVGP  GNGNYTPLSL  MSPYLKKCVL  TSEDPSFMTH  RGFINEAFRE  SITKNIRTKK480
FSRGASTISM  QLVKNVFLTR  EKTLSRKLEE  ILLVYILENN  RISSKDRMLE  VYFNIIEWGP540
NVYGIAEASE  FYFQKRPWDL  NVNQCLFLAT  IIPNPKGFMA  KFDANNKLKP  AAKQTEKFLT600
NLMFKRNILM  ANDTIGNFPL  EISGRAKFFL  KQKPTSIDSD  KTPVEEFEF649

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help