CAZyme3D

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Entry ID

Information for CAZyme ID: QBZ68892.1

Basic Information

GenBank IDQBZ68892.1
FamilyCBM18, GH19
Sequence Length324
UniProt IDA0A4D6DS26(100,100)Download
Average pLDDT?89.07
CAZy50 ID48744
CAZy50 RepNo, ACS04172.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID4690
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderLiliales
FamilyLiliaceae
GenusLilium
SpeciesLilium longiflorum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTAIMVLVLL  ISVSAILFHC  LAQQCGTQRG  GAVCPGGLCC  SQFGYCGSTI  AYCGDGCQSQ60
CIGGGSGGGS  GGGGGGGEAG  GGVSSIINSS  LFNQMLLHRN  DAVCPANGFY  TYDAFIAAAN120
SFRGFGSTGD  ADTQKREIAA  FLAQTSHETT  GGWSTAPDGQ  FAWGYCFKQE  QGNPPPDYCV180
ESLQWPCAAD  KKYYGRGPIQ  ISYNYNYGPA  GQAINSDLLN  NPDLVATDPT  ISFKTALWFW240
MTAQSPKPSC  HAVATGGWTP  SAADQSAGRV  PGYGVITNII  NGGIECGHGA  DSAVADRIGF300
YQRYCDILGV  SYGANLDCYN  QQHF324

Predicted 3D structure by AlphaFold2 with pLDDT = 89.07 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM18(24-61)+GH19(83-318)

MTAIMVLVLL  ISVSAILFHC  LAQQCGTQRG  GAVCPGGLCC  SQFGYCGSTI  AYCGDGCQSQ60
CIGGGSGGGS  GGGGGGGEAG  GGVSSIINSS  LFNQMLLHRN  DAVCPANGFY  TYDAFIAAAN120
SFRGFGSTGD  ADTQKREIAA  FLAQTSHETT  GGWSTAPDGQ  FAWGYCFKQE  QGNPPPDYCV180
ESLQWPCAAD  KKYYGRGPIQ  ISYNYNYGPA  GQAINSDLLN  NPDLVATDPT  ISFKTALWFW240
MTAQSPKPSC  HAVATGGWTP  SAADQSAGRV  PGYGVITNII  NGGIECGHGA  DSAVADRIGF300
YQRYCDILGV  SYGANLDCYN  QQHF324

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help