CAZyme3D

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Entry ID

Information for CAZyme ID: QBR06102.1

Basic Information

GenBank IDQBR06102.1
FamilyCBM20, GH13_32
Sequence Length574
UniProt IDA0A4P7DH02(100,100)Download
Average pLDDT?89.75
CAZy50 ID37232
CAZy50 RepNo, BAJ28149.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2420135
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. S501
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A4P7DH02.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MARRPLSGAL  ALTMGAAVLA  VPAGLGAAGT  AQAAPPGEKD  VTAVMFEWKF  SSVAQACTSS60
LGPAGYGYVQ  VSPPQEHIQG  AQWWTSYQPV  SYKIAGRLGD  RAAFANMVNT  CHSAGVKVIA120
DSVINHMSAG  SGTGTGGSSY  TKYNYPGLYS  ANDMNDCQSQ  ISNYGDRANV  QNCELVGLAD180
LDTGEDYVRG  KIAGYLNDLL  SLGVDGFRID  AAKHMPAADL  ANIKSRLSNP  GVYWKHEAIY240
GAGEAVSPSE  YLGSGDVQEF  RYGRGLKQVF  NNENLAYLKN  FGEGWGFMES  GRSAVFVDNH300
DTERGGDTLN  YKDGANYTLA  SVFMLAYPYG  SPDVHSGYEW  SDKDAGPPNG  GQVNACYSDG360
WKCQHAWREI  SSMVGFRNTA  RGQAVTNWWD  NGGDQIAFGR  GSKAYVAINH  EGSSLSRTFQ420
TSLPAGDYCD  VQSGKGVTVN  SSGQFTATLG  SNTAVALHVG  ARTCTGGGTT  PDPGTGQSGA480
SFGVNATTQV  GQNIYVTGSQ  AALGSWAPGS  ALKLDPASYP  VWKLDVALPA  GTSFEYKYLR540
KDASGNVTWE  SGANRTATVP  SSGKVALTAD  VWRS574

Predicted 3D structure by AlphaFold2 with pLDDT = 89.75 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_32(65-328)+CBM20(481-564)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help