CAZyme3D

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Entry ID

Information for CAZyme ID: QBQ15911.1

Basic Information

GenBank IDQBQ15911.1
FamilyCE4
Sequence Length319
UniProt IDA0A4P7B3X1(100,100)Download
Average pLDDT?95.14
CAZy50 ID35812
CAZy50 RepNo, QXC61059.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID29430
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter haemolyticus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTLIDQTNHV  THDYPRDMLG  YANHPPHAQW  PNQAKIAVQF  VLNYEEGGEK  HIFHGDEGSE60
QFLSEISGAE  SYPARHLSMD  SIYEYGSRVG  FWRIHQEFAK  RNLPMSIFAV  AMALQRNPLV120
VEAIKQHHYD  VVSHGLRWIH  YQNVDIETEK  AHMAEAMQIL  KDLFGEYPTG  WYTGRDSPNT180
RQLLAEYDQI  QYDSDYYGDD  LPFWTTLSKE  NGETRPHLII  PYTLDTNDMK  FASPTGFNRS240
EDFFEYLKDA  FDVLYAEGAT  SPKMLSIGMH  CRILGRPARF  KALQRFLDYV  QNHDRVWICT300
RQQIAEHWYK  YHPYQDDIT319

Predicted 3D structure by AlphaFold2 with pLDDT = 95.14 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(91-186)

MTLIDQTNHV  THDYPRDMLG  YANHPPHAQW  PNQAKIAVQF  VLNYEEGGEK  HIFHGDEGSE60
QFLSEISGAE  SYPARHLSMD  SIYEYGSRVG  FWRIHQEFAK  RNLPMSIFAV  AMALQRNPLV120
VEAIKQHHYD  VVSHGLRWIH  YQNVDIETEK  AHMAEAMQIL  KDLFGEYPTG  WYTGRDSPNT180
RQLLAEYDQI  QYDSDYYGDD  LPFWTTLSKE  NGETRPHLII  PYTLDTNDMK  FASPTGFNRS240
EDFFEYLKDA  FDVLYAEGAT  SPKMLSIGMH  CRILGRPARF  KALQRFLDYV  QNHDRVWICT300
RQQIAEHWYK  YHPYQDDIT319

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help