CAZyme3D

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Entry ID

Information for CAZyme ID: QBB05513.1

Basic Information

GenBank IDQBB05513.1
FamilyGT17
Sequence Length298
UniProt IDA0A411GHT1(100,100)Download
Average pLDDT?92.79
CAZy50 ID156664
CAZy50 RepNo, BBZ88074.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID550
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter cloacae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIYDCFLYYD  EDMLLEIRLN  TLAGVVDRFV  IVESTYTFTG  KKRPLHFDIN  KYSQFKDKII60
YVVHDKEPIT  KAAEESHPAR  EVIPGLPEGM  VVDAWANEAA  QRNAIMQGLT  HANDNDLILV120
SDVDEIFSPQ  VVASINPKKL  CTTIYQNFYN  YQFNLQIFNT  DNTPRKCKLP  RATQYKNLVS180
FFGGEPESFR  NLKRTRSVKN  WSWLKWNWFK  INNSIIDNGG  WHFSWVMTPE  RISEKMSTIS240
HTEYDLPEFN  NPEHIMKVIK  NAEDIWGRDR  TLIKQELTVE  NFPEYIVRHK  DKFSAFII298

Predicted 3D structure by AlphaFold2 with pLDDT = 92.79 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT17(2-295)

MIYDCFLYYD  EDMLLEIRLN  TLAGVVDRFV  IVESTYTFTG  KKRPLHFDIN  KYSQFKDKII60
YVVHDKEPIT  KAAEESHPAR  EVIPGLPEGM  VVDAWANEAA  QRNAIMQGLT  HANDNDLILV120
SDVDEIFSPQ  VVASINPKKL  CTTIYQNFYN  YQFNLQIFNT  DNTPRKCKLP  RATQYKNLVS180
FFGGEPESFR  NLKRTRSVKN  WSWLKWNWFK  INNSIIDNGG  WHFSWVMTPE  RISEKMSTIS240
HTEYDLPEFN  NPEHIMKVIK  NAEDIWGRDR  TLIKQELTVE  NFPEYIVRHK  DKFSAFII298

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help