CAZyme3D

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Entry ID

Information for CAZyme ID: QAV20527.1

Basic Information

GenBank IDQAV20527.1
FamilyCBM32, CBM51
Sequence Length738
UniProt IDA0A410X1Q2(100,100)Download
Average pLDDT?90.52
CAZy50 ID27439
CAZy50 RepNo, SYX84083.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID79263
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus chitinolyticus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRKLKKSLQI  LSLMAVTAAT  VVVPVSPPRV  LAQTSETAIT  QQSNLVVQRN  FEVKALGDIW60
AEGERERRAK  GYADARKIFQ  PTGLYAKANE  QIEIEVSGDK  PITAIIGTHR  HDKEWAIRYP120
LKAGKNTISS  PNGGLLSFDN  SNNEGSIQVN  VVSGGSPVPF  FVLGKNTKAD  WQAMMSAYPN180
APSVVLQSEK  ALLVFTYASA  QNHILNQDPV  PVLQTYDTLI  GAQDKISGLS  NSDSDPRHHL240
DKHLIGFIES  PLDTGSYYAM  ATWDGAIMPT  RSEANADALN  LTRMGWGQYH  EAGHLRQQEP300
WTWGEMSEVT  VNLYSIAAKK  ALKPTEPARS  QGEYLTAFTF  VDQPTKNFTD  SNSKLEMLWQ360
LNLAFGDNFY  PELHRLYREM  AKTDLPTTDD  QKKQAFILNT  SKVAHYNLTP  FFDKWGLPAT420
NETKNKINSL  SLPLLTAPIW  FGSEYNIIKP  TDGVDKVKGI  GGIIAATTNS  QETSGENNAA480
AYAFDGNTNT  LWHSEWSKPN  QFPYNITAKY  LNPSTFFKLT  YLPRQTQENG  IITKYRILTS540
LDGVSFTEVA  TGTWAKDKTE  KTVTFPPTLA  KYVRLEVPQG  GGTNGFASAS  EIKIFETAQP600
VTTYLSDIDW  FSATIGWGTI  RKDRSVDGNT  LKLNDKAYTK  GLGTHANSEI  VYKLDGKYTS660
FAALVGVDSE  VGSVSTVEFQ  VLVDNQVVFS  SGKMNKTTEA  KEVNVNLSGK  NELKLKVTDG720
GDGIDSDHAD  WVNARLIK738

Predicted 3D structure by AlphaFold2 with pLDDT = 90.52 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM32(466-592)+CBM51(603-736)

MRKLKKSLQI  LSLMAVTAAT  VVVPVSPPRV  LAQTSETAIT  QQSNLVVQRN  FEVKALGDIW60
AEGERERRAK  GYADARKIFQ  PTGLYAKANE  QIEIEVSGDK  PITAIIGTHR  HDKEWAIRYP120
LKAGKNTISS  PNGGLLSFDN  SNNEGSIQVN  VVSGGSPVPF  FVLGKNTKAD  WQAMMSAYPN180
APSVVLQSEK  ALLVFTYASA  QNHILNQDPV  PVLQTYDTLI  GAQDKISGLS  NSDSDPRHHL240
DKHLIGFIES  PLDTGSYYAM  ATWDGAIMPT  RSEANADALN  LTRMGWGQYH  EAGHLRQQEP300
WTWGEMSEVT  VNLYSIAAKK  ALKPTEPARS  QGEYLTAFTF  VDQPTKNFTD  SNSKLEMLWQ360
LNLAFGDNFY  PELHRLYREM  AKTDLPTTDD  QKKQAFILNT  SKVAHYNLTP  FFDKWGLPAT420
NETKNKINSL  SLPLLTAPIW  FGSEYNIIKP  TDGVDKVKGI  GGIIAATTNS  QETSGENNAA480
AYAFDGNTNT  LWHSEWSKPN  QFPYNITAKY  LNPSTFFKLT  YLPRQTQENG  IITKYRILTS540
LDGVSFTEVA  TGTWAKDKTE  KTVTFPPTLA  KYVRLEVPQG  GGTNGFASAS  EIKIFETAQP600
VTTYLSDIDW  FSATIGWGTI  RKDRSVDGNT  LKLNDKAYTK  GLGTHANSEI  VYKLDGKYTS660
FAALVGVDSE  VGSVSTVEFQ  VLVDNQVVFS  SGKMNKTTEA  KEVNVNLSGK  NELKLKVTDG720
GDGIDSDHAD  WVNARLIK738

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help