CAZyme3D

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Entry ID

Information for CAZyme ID: QAR72586.1

Basic Information

GenBank IDQAR72586.1
FamilyGH170
Sequence Length362
UniProt IDA0A2S7R781(100,100)Download
Average pLDDT?95.59
CAZy50 ID116935
CAZy50 RepNo, AVR00235.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1352
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus faecium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRSLGISLY  PDHSDPQKDR  EYIETAHQYG  FSRIFMSMLE  ISEDPEVVQK  KFQQLIFFAK60
ERGFETILDV  SPAIFEQLNI  SYDDLGFFHK  LGADGIRLDL  GFDGKKEALL  TFNPYQLAIE120
LNMSNDVAYL  ENILTHQANT  SFLYGCHNFY  PQEGTGLPYH  FFQSSSERFK  KNGIRTAAFI180
TSQSGRIGPW  DINDGLPTLE  MHRHFSVETA  AKHLFATNLI  DDIIIGNAYA  SEEELKSLGH240
LDRYQTVFRV  EFVANINEVE  RQIVLEEQHV  RRGDITDQVI  RSTEVRKKYQ  KYENKAHDTE300
FEFVVGDVVV  GNDRFGKYKN  ELQIVLEPHS  DPRKNKVGHI  IQEELILLPF  IHPWSKFKFI360
EK362

Predicted 3D structure by AlphaFold2 with pLDDT = 95.59 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH170(5-359)

MKRSLGISLY  PDHSDPQKDR  EYIETAHQYG  FSRIFMSMLE  ISEDPEVVQK  KFQQLIFFAK60
ERGFETILDV  SPAIFEQLNI  SYDDLGFFHK  LGADGIRLDL  GFDGKKEALL  TFNPYQLAIE120
LNMSNDVAYL  ENILTHQANT  SFLYGCHNFY  PQEGTGLPYH  FFQSSSERFK  KNGIRTAAFI180
TSQSGRIGPW  DINDGLPTLE  MHRHFSVETA  AKHLFATNLI  DDIIIGNAYA  SEEELKSLGH240
LDRYQTVFRV  EFVANINEVE  RQIVLEEQHV  RRGDITDQVI  RSTEVRKKYQ  KYENKAHDTE300
FEFVVGDVVV  GNDRFGKYKN  ELQIVLEPHS  DPRKNKVGHI  IQEELILLPF  IHPWSKFKFI360
EK362

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help