CAZyme3D

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Entry ID

Information for CAZyme ID: NP_390566.1

Basic Information

GenBank IDNP_390566.1
FamilyGH46
Sequence Length277
UniProt IDO07921(100,100)Download
Average pLDDT?88.95
CAZy50 ID39594
CAZy50 RepNo, UWE04289.1
Structure Cluster-
EC Number(s)3.2.1.132
Substrates(s)chitosan

Taxonomy

Tax ID224308
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus subtilis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKISMQKADF  WKKAAISLLV  FTMFFTLMMS  ETVFAAGLNK  DQKRRAEQLT  SIFENGTTEI60
QYGYVERLDD  GRGYTCGRAG  FTTATGDALE  VVEVYTKAVP  NNKLKKYLPE  LRRLAKEESD120
DTSNLKGFAS  AWKSLANDKE  FRAAQDKVND  HLYYQPAMKR  SDNAGLKTAL  ARAVMYDTVI180
QHGDGDDPDS  FYALIKRTNK  KAGGSPKDGI  DEKKWLNKFL  DVRYDDLMNP  ANHDTRDEWR240
ESVARVDVLR  SIAKENNYNL  NGPIHVRSNE  YGNFVIK277

Predicted 3D structure by AlphaFold2 with pLDDT = 88.95 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH46(37-261)

MKISMQKADF  WKKAAISLLV  FTMFFTLMMS  ETVFAAGLNK  DQKRRAEQLT  SIFENGTTEI60
QYGYVERLDD  GRGYTCGRAG  FTTATGDALE  VVEVYTKAVP  NNKLKKYLPE  LRRLAKEESD120
DTSNLKGFAS  AWKSLANDKE  FRAAQDKVND  HLYYQPAMKR  SDNAGLKTAL  ARAVMYDTVI180
QHGDGDDPDS  FYALIKRTNK  KAGGSPKDGI  DEKKWLNKFL  DVRYDDLMNP  ANHDTRDEWR240
ESVARVDVLR  SIAKENNYNL  NGPIHVRSNE  YGNFVIK277

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help