CAZyme3D

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Entry ID

Information for CAZyme ID: NP_056167.1

Basic Information

GenBank IDNP_056167.1
FamilyGT65
Sequence Length388
UniProt IDQ9H488-1(100,100)Download
Average pLDDT?93.05
CAZy50 ID100839
CAZy50 RepNo, CAH03710.1
Structure Cluster-
EC Number(s)2.4.1.221
Substrates(s)-

Taxonomy

Tax ID9606
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderPrimates
FamilyHominidae
GenusHomo
SpeciesHomo sapiens
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/Q9H488-1.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGAAAWARPL  SVSFLLLLLP  LPGMPAGSWD  PAGYLLYCPC  MGRFGNQADH  FLGSLAFAKL60
LNRTLAVPPW  IEYQHHKPPF  TNLHVSYQKY  FKLEPLQAYH  RVISLEDFME  KLAPTHWPPE120
KRVAYCFEVA  AQRSPDKKTC  PMKEGNPFGP  FWDQFHVSFN  KSELFTGISF  SASYREQWSQ180
RFSPKEHPVL  ALPGAPAQFP  VLEEHRPLQK  YMVWSDEMVK  TGEAQIHAHL  VRPYVGIHLR240
IGSDWKNACA  MLKDGTAGSH  FMASPQCVGY  SRSTAAPLTM  TMCLPDLKEI  QRAVKLWVRS300
LDAQSVYVAT  DSESYVPELQ  QLFKGKVKVV  SLKPEVAQVD  LYILGQADHF  IGNCVSSFTA360
FVKRERDLQG  RPSSFFGMDR  PPKLRDEF388

Predicted 3D structure by AlphaFold2 with pLDDT = 93.05 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT65(35-373)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help