Information for CAZyme ID: ELP35546.1
Basic Information
GenBank ID | ELP35546.1 |
Family | GH174 |
Sequence Length | 1171 |
UniProt ID | L7CR53(100,100)![]() |
Average pLDDT? | 89.74 |
CAZy50 ID | 8174 |
CAZy50 Rep | No, EMB13744.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 993516 |
Kingdom | Bacteria |
Phylum | Planctomycetota |
Class | Planctomycetia |
Order | Pirellulales |
Family | Pirellulaceae |
Genus | Rhodopirellula |
Species | Rhodopirellula baltica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLLALMAALC GADPASAQPK ETLPALAEGR APENFKEMWR GFNPRREPLN VEVVKEWEED | 60 |
DVDLKIVRFR IGVFKGHEAK LAAVYGAPKS ATNLPGLVQI HGGGQYADHQ ACVANAKRGY | 120 |
ATISIAWAGR ISAPGHRVSP DEVKLFWDQK TDDPAYRLTT DWGVVDGYHA PSRNRGNQFP | 180 |
SAKPAEWTLD AVESPRNSGW FLCAMAARRA LTFLESQPEV DSERLGVYGH SMGGKLTVLT | 240 |
AADSRVKAAA PSCGGISDRY NDSELFRKTL GDDVSLREIQ CPIIFLSPAN DFHGRIGDLP | 300 |
SAISEIQSNE WRVTCSPHHN HQDTPAYEAA TLLWFDQHLK NAFQFPKSPR LTMDWDVADG | 360 |
VPKAKVQVDE SMPIESVDVY YTQNGKPGET PADRDDVVHR FWHHASADQS GDAWTAKMPI | 420 |
SSVSKPLWVY ANVTYRLPES VEGVGYYYRT YRTDEVNLSS VVQMFDAEQL VTKDIKATKQ | 480 |
RTTLIEDFAG DWEHEWFTYR PEQWARTTNK FSADQYKAPA EAKLVLEVQS GQANSLVVMI | 540 |
DGHAAAIELV GGQTWQTITL SPDDFENAAG ESLAHWDGIR QLKLSDAERL SSGRGESAHS | 600 |
RIVGRRWKGE PPQFRNLRWT TQTVRSTEPR LDVFPAPTVG VNSINGATHF QTEYSPSPSV | 660 |
WDDRIDEAAV FQVEMQHQQS PADSFQLRMG KGGQIYSLRG SFGESLPPSW RKPGGKLSPW | 720 |
NDEVWQFVAV CTQYNGIKTL RANRRQSEQD SSQVEAVKNQ LSELGLSDTF FVHNSGAYIP | 780 |
NSSELKSLYC PLLAYEIDED ARAIRMLNWG LVPQIRSVHR SPLLYYTQIR DAGDGVIEMT | 840 |
WVVHNFSQRE DVVFDHLNAP WGGTRISSLP LRYVASPEGE LLEREGFLSE HGTVNVRETA | 900 |
GWNLSCQSDA DDSPSLALVY GRDKHLEREL ERKANGEAYC QFKHSLYRDW RANEPLYKTE | 960 |
WKDWATRPEN SFRNYDVCEI IPKLRIVPGS TIWFRSYLVV GEKAQAMQRA QSLVDHVDYG | 1020 |
LLDFDADQCP MTTVVRDGVS MQLFAKPVPR SLPVFEIEHV KTGQNVLTTD PYFFVENQSL | 1080 |
DLDLPSQHPQ RDYFASVRGY FLDRNHSKWK RLVGYAMAER PAENASNTSG NWKRLSRVLK | 1140 |
SQVAAEDNKY HRDVWVQYSD SASPVETRAT E | 1171 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.74 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) :
MLLALMAALC GADPASAQPK ETLPALAEGR APENFKEMWR GFNPRREPLN VEVVKEWEED | 60 |
DVDLKIVRFR IGVFKGHEAK LAAVYGAPKS ATNLPGLVQI HGGGQYADHQ ACVANAKRGY | 120 |
ATISIAWAGR ISAPGHRVSP DEVKLFWDQK TDDPAYRLTT DWGVVDGYHA PSRNRGNQFP | 180 |
SAKPAEWTLD AVESPRNSGW FLCAMAARRA LTFLESQPEV DSERLGVYGH SMGGKLTVLT | 240 |
AADSRVKAAA PSCGGISDRY NDSELFRKTL GDDVSLREIQ CPIIFLSPAN DFHGRIGDLP | 300 |
SAISEIQSNE WRVTCSPHHN HQDTPAYEAA TLLWFDQHLK NAFQFPKSPR LTMDWDVADG | 360 |
VPKAKVQVDE SMPIESVDVY YTQNGKPGET PADRDDVVHR FWHHASADQS GDAWTAKMPI | 420 |
SSVSKPLWVY ANVTYRLPES VEGVGYYYRT YRTDEVNLSS VVQMFDAEQL VTKDIKATKQ | 480 |
RTTLIEDFAG DWEHEWFTYR PEQWARTTNK FSADQYKAPA EAKLVLEVQS GQANSLVVMI | 540 |
DGHAAAIELV GGQTWQTITL SPDDFENAAG ESLAHWDGIR QLKLSDAERL SSGRGESAHS | 600 |
RIVGRRWKGE PPQFRNLRWT TQTVRSTEPR LDVFPAPTVG VNSINGATHF QTEYSPSPSV | 660 |
WDDRIDEAAV FQVEMQHQQS PADSFQLRMG KGGQIYSLRG SFGESLPPSW RKPGGKLSPW | 720 |
NDEVWQFVAV CTQYNGIKTL RANRRQSEQD SSQVEAVKNQ LSELGLSDTF FVHNSGAYIP | 780 |
NSSELKSLYC PLLAYEIDED ARAIRMLNWG LVPQIRSVHR SPLLYYTQIR DAGDGVIEMT | 840 |
WVVHNFSQRE DVVFDHLNAP WGGTRISSLP LRYVASPEGE LLEREGFLSE HGTVNVRETA | 900 |
GWNLSCQSDA DDSPSLALVY GRDKHLEREL ERKANGEAYC QFKHSLYRDW RANEPLYKTE | 960 |
WKDWATRPEN SFRNYDVCEI IPKLRIVPGS TIWFRSYLVV GEKAQAMQRA QSLVDHVDYG | 1020 |
LLDFDADQCP MTTVVRDGVS MQLFAKPVPR SLPVFEIEHV KTGQNVLTTD PYFFVENQSL | 1080 |
DLDLPSQHPQ RDYFASVRGY FLDRNHSKWK RLVGYAMAER PAENASNTSG NWKRLSRVLK | 1140 |
SQVAAEDNKY HRDVWVQYSD SASPVETRAT E | 1171 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.