CAZyme3D

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Entry ID

Information for CAZyme ID: CUI17089.1

Basic Information

GenBank IDCUI17089.1
FamilyGT9
Sequence Length354
UniProt IDA0A0U5ESE5(100,100)Download
Average pLDDT?93.90
CAZy50 ID125256
CAZy50 RepNo, CAF23431.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID389348
KingdomBacteria
PhylumChlamydiota
ClassChlamydiia
OrderParachlamydiales
FamilyParachlamydiaceae
GenusCandidatus Protochlamydia
SpeciesCandidatus Protochlamydia naegleriophila

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKILIIKTSS  LGDIIHAFPV  LQYLRRLYPH  AQIDWLIEQS  FGELVQAHPD  LNHAIPVQIK60
KWRSNIWKKE  CWQEIRALLQ  RIRQCRYDLV  LDLQGNIKSG  LLTALANGLR  KVGFGWRSVP120
EWPNTFLTHE  RYDPPCGRNI  REDYLFLAQS  ALGEAINDVS  GVALQVDSKQ  ALKLEKLMQV180
DSLKGGPRIM  VCPGSNWDNK  QLSLEILQAF  LEQISKKLDG  RFLFVWGTPK  EKEMVEKLQE240
NFPDSSLIMD  RFPLPVLQSL  MSKTQLVIAM  DSLPLHLAGT  TPTPTYSIFG  ASLAHKYKPL300
GNLHHAFQGS  CPYGKSFEKR  CPILRTCSTG  NCVKQIDANV  LFDHFFTWWK  SLTF354

Predicted 3D structure by AlphaFold2 with pLDDT = 93.90 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT9(76-323)

MKILIIKTSS  LGDIIHAFPV  LQYLRRLYPH  AQIDWLIEQS  FGELVQAHPD  LNHAIPVQIK60
KWRSNIWKKE  CWQEIRALLQ  RIRQCRYDLV  LDLQGNIKSG  LLTALANGLR  KVGFGWRSVP120
EWPNTFLTHE  RYDPPCGRNI  REDYLFLAQS  ALGEAINDVS  GVALQVDSKQ  ALKLEKLMQV180
DSLKGGPRIM  VCPGSNWDNK  QLSLEILQAF  LEQISKKLDG  RFLFVWGTPK  EKEMVEKLQE240
NFPDSSLIMD  RFPLPVLQSL  MSKTQLVIAM  DSLPLHLAGT  TPTPTYSIFG  ASLAHKYKPL300
GNLHHAFQGS  CPYGKSFEKR  CPILRTCSTG  NCVKQIDANV  LFDHFFTWWK  SLTF354

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help