CAZyme3D

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Entry ID

Information for CAZyme ID: CRI40030.1

Basic Information

GenBank IDCRI40030.1
FamilyGT30
Sequence Length437
UniProt IDA0A0F7X7A3(100,100)Download
Average pLDDT?89.52
CAZy50 ID82831
CAZy50 RepNo, AEB41907.1
Structure Cluster-
EC Number(s)2.4.99.-
Substrates(s)-

Taxonomy

Tax ID83558
KingdomBacteria
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia pneumoniae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMLRGVHRIF  KCFYDVVLVC  AFVIALPKLL  YKMLVYGKYK  KSLAVRFGLK  KPHVPGEGPL60
VWFHGASVGE  VRLLLPVLEK  FCEEFPGWRC  LVTSCTELGV  QVASQVFIPM  GATVSILPLD120
FSIIIKSVVA  KLRPSLVVFS  EGDCWLNFIE  EAKRIGATTL  VINGRISIDS  SKRFKFLKRL180
GKNYFSPVDG  FLLQDEVQKQ  RFLSLGIPEH  KLQVTGNIKT  YVAAQTALHL  ERETWRDRLR240
LPTDSKLVIL  GSMHRSDAGK  WLPVVQKLIK  EGVSVLWVPR  HVEKTKDVEE  SLHRLHIPYG300
LWSRGANFSY  VPVVVVDEIG  LLKQLYVAGD  LAFVGGTFDP  KIGGHNLLEP  LQCEVPLIFG360
PHITSQSELA  QRLLLSGAGL  CLDEIEPIID  TVSFLLNNQE  VREAYVQKGK  VFVKAETASF420
DRTWRALKSY  IPLYKNS437

Predicted 3D structure by AlphaFold2 with pLDDT = 89.52 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT30(42-221)

MMLRGVHRIF  KCFYDVVLVC  AFVIALPKLL  YKMLVYGKYK  KSLAVRFGLK  KPHVPGEGPL60
VWFHGASVGE  VRLLLPVLEK  FCEEFPGWRC  LVTSCTELGV  QVASQVFIPM  GATVSILPLD120
FSIIIKSVVA  KLRPSLVVFS  EGDCWLNFIE  EAKRIGATTL  VINGRISIDS  SKRFKFLKRL180
GKNYFSPVDG  FLLQDEVQKQ  RFLSLGIPEH  KLQVTGNIKT  YVAAQTALHL  ERETWRDRLR240
LPTDSKLVIL  GSMHRSDAGK  WLPVVQKLIK  EGVSVLWVPR  HVEKTKDVEE  SLHRLHIPYG300
LWSRGANFSY  VPVVVVDEIG  LLKQLYVAGD  LAFVGGTFDP  KIGGHNLLEP  LQCEVPLIFG360
PHITSQSELA  QRLLLSGAGL  CLDEIEPIID  TVSFLLNNQE  VREAYVQKGK  VFVKAETASF420
DRTWRALKSY  IPLYKNS437

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help