CAZyme3D

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Entry ID

Information for CAZyme ID: CQR64987.1

Basic Information

GenBank IDCQR64987.1
FamilyGH51
Sequence Length824
UniProt IDA0A0F7W527(100,100)Download
Average pLDDT?93.77
CAZy50 ID2058
CAZy50 RepNo, WAC69898.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1437453
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces leeuwenhoekii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSRTRWRLGL  SATALLTATA  VLPAPAHAED  VTDYTITVDP  AAQGAAIDDT  MYGVFFEDIN60
RAADGGLYAE  LVQNRSFEYS  TADNASYTPL  TSWSVTGAAE  AVNDSGRLNE  RNRTYLSLGA120
GSSVTNAGYN  TGIRVEQGKK  YDFSVWARAE  GGTTLTVTLK  DAAGTLATAR  QIAVKGGWAR180
YRATFTATRT  SNRGRLAVAA  TNAAALDMVS  LFPRDTYKNQ  PNGLRKDLAE  KIEALRPGFL240
RFPGGCLVNT  GSMEDYSEAS  GWQRERSYQW  KDTIGPVEQR  ATNANFWGYN  QSYGLGYYEY300
FRFAEDIGAM  PLPVVPALVT  GCGQNKATDD  EALLKRHIQD  TLDLIEFANG  PATSTWGKVR360
ARMGHPRPFR  LTHIGVGNEE  NLPHEFYARF  QKFRAAIEAK  YPEITVVSNS  GPDDSGTTFE420
TAWKLNREGG  VDMVDEHYYN  SPQWFLQNND  RYDSYDRNGP  KVFLGEYASQ  GNAWKNALAE480
AAYMTGLERN  ADVVKLASYA  PLLANEDYVQ  WRPDMIWFNN  RASWGSANYE  VQKLFMNNVG540
DRVVPSRATG  TPSVSGPITG  AIGLSTWATS  AAYDDVKVTA  ADGSTLLSDD  FSDGAARWKQ600
VGGGSWSVQD  GQYVQTDAAA  ENTLVTAGDP  AWKDYDLHVK  ATKKSGKEGF  LVAFGVKDTG660
NYYWWNLGGW  NNTQSAVEQA  SDGGKSTVIS  KAGSIETGRA  YDIDIKVRGR  QVTLYLDGQE720
WGRFTDDKPA  EPFRQVVTRD  ARTGELIVKV  VNAQDTAART  AIDLGGAEVA  SRARVTTLAA780
DQDAVNTETD  TPVTPVSSTF  SGVADTFTYT  FPANSVTFLR  IPRR824

Predicted 3D structure by AlphaFold2 with pLDDT = 93.77 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM4(70-197)+GH51(201-822)

MSRTRWRLGL  SATALLTATA  VLPAPAHAED  VTDYTITVDP  AAQGAAIDDT  MYGVFFEDIN60
RAADGGLYAE  LVQNRSFEYS  TADNASYTPL  TSWSVTGAAE  AVNDSGRLNE  RNRTYLSLGA120
GSSVTNAGYN  TGIRVEQGKK  YDFSVWARAE  GGTTLTVTLK  DAAGTLATAR  QIAVKGGWAR180
YRATFTATRT  SNRGRLAVAA  TNAAALDMVS  LFPRDTYKNQ  PNGLRKDLAE  KIEALRPGFL240
RFPGGCLVNT  GSMEDYSEAS  GWQRERSYQW  KDTIGPVEQR  ATNANFWGYN  QSYGLGYYEY300
FRFAEDIGAM  PLPVVPALVT  GCGQNKATDD  EALLKRHIQD  TLDLIEFANG  PATSTWGKVR360
ARMGHPRPFR  LTHIGVGNEE  NLPHEFYARF  QKFRAAIEAK  YPEITVVSNS  GPDDSGTTFE420
TAWKLNREGG  VDMVDEHYYN  SPQWFLQNND  RYDSYDRNGP  KVFLGEYASQ  GNAWKNALAE480
AAYMTGLERN  ADVVKLASYA  PLLANEDYVQ  WRPDMIWFNN  RASWGSANYE  VQKLFMNNVG540
DRVVPSRATG  TPSVSGPITG  AIGLSTWATS  AAYDDVKVTA  ADGSTLLSDD  FSDGAARWKQ600
VGGGSWSVQD  GQYVQTDAAA  ENTLVTAGDP  AWKDYDLHVK  ATKKSGKEGF  LVAFGVKDTG660
NYYWWNLGGW  NNTQSAVEQA  SDGGKSTVIS  KAGSIETGRA  YDIDIKVRGR  QVTLYLDGQE720
WGRFTDDKPA  EPFRQVVTRD  ARTGELIVKV  VNAQDTAART  AIDLGGAEVA  SRARVTTLAA780
DQDAVNTETD  TPVTPVSSTF  SGVADTFTYT  FPANSVTFLR  IPRR824

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help