CAZyme3D

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Entry ID

Information for CAZyme ID: CEI67992.1

Basic Information

GenBank IDCEI67992.1
FamilyGH88
Sequence Length512
UniProt IDA0A2L2TAL7(100,100)Download
Average pLDDT?88.54
CAZy50 ID54340
CAZy50 RepNo, EAA67047.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID56646
KingdomEukaryota
PhylumAscomycota
ClassSordariomycetes
OrderHypocreales
FamilyNectriaceae
GenusFusarium
SpeciesFusarium venenatum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGFSKESASP  ASSVTDENSI  ESETSWSKGA  ADSKELDIYE  PKPSLHKVLP  ELFEENVFAK60
PYRTASLGLE  RLDPARDGFP  EIVPQQGPKQ  GQWEFREPDF  WTCGFFPGTL  YALLERSIKY120
PGSLGTDDTV  LQSAATIRKY  LLPLCKSWSE  PLHAMSLRTD  THDIGFIIMP  ALRRDWELFG180
NERSLTSIVQ  AANSLATRYV  QSAGAIRSWD  CLLKNDITVT  DTENNLLVII  DSMCNLDLLF240
YAAAQTGEQR  LADIAATHAT  TLLKTHLRPE  GVKSLVKDGY  NGQLYSTCHV  ANITPQTGDL300
KWRWTAQGYA  NDSTWSRGQA  WAILGYTQSY  SWTKDETFLE  VACGTAEYFM  YRLETSPSCV360
ELSSDTSDNA  RKGRHVPLWD  FDAPIENPQD  PLRDSSSGII  AANGMLLLSQ  ALISVGKHAL420
SRRFFDAAIT  IIRDTLDVSL  ATEKARFTKD  RDGTSPLPVE  DVVFGETFDA  LLKHGTANNN480
ENARRRYSNH  GLVYGDYYLV  EFGNLLSSMG  LV512

Predicted 3D structure by AlphaFold2 with pLDDT = 88.54 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH88(96-442)

MGFSKESASP  ASSVTDENSI  ESETSWSKGA  ADSKELDIYE  PKPSLHKVLP  ELFEENVFAK60
PYRTASLGLE  RLDPARDGFP  EIVPQQGPKQ  GQWEFREPDF  WTCGFFPGTL  YALLERSIKY120
PGSLGTDDTV  LQSAATIRKY  LLPLCKSWSE  PLHAMSLRTD  THDIGFIIMP  ALRRDWELFG180
NERSLTSIVQ  AANSLATRYV  QSAGAIRSWD  CLLKNDITVT  DTENNLLVII  DSMCNLDLLF240
YAAAQTGEQR  LADIAATHAT  TLLKTHLRPE  GVKSLVKDGY  NGQLYSTCHV  ANITPQTGDL300
KWRWTAQGYA  NDSTWSRGQA  WAILGYTQSY  SWTKDETFLE  VACGTAEYFM  YRLETSPSCV360
ELSSDTSDNA  RKGRHVPLWD  FDAPIENPQD  PLRDSSSGII  AANGMLLLSQ  ALISVGKHAL420
SRRFFDAAIT  IIRDTLDVSL  ATEKARFTKD  RDGTSPLPVE  DVVFGETFDA  LLKHGTANNN480
ENARRRYSNH  GLVYGDYYLV  EFGNLLSSMG  LV512

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help